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The map label for this gene is secF [H]

Identifier: 218549931

GI number: 218549931

Start: 2684773

End: 2685744

Strand: Reverse

Name: secF [H]

Synonym: EFER_2616

Alternate gene names: 218549931

Gene position: 2685744-2684773 (Counterclockwise)

Preceding gene: 218549932

Following gene: 218549930

Centisome position: 58.53

GC content: 50.51

Gene sequence:

>972_bases
GTGGCACAGGAATATACTGTTGAACAACTAAATCATGGCCGTAAAGTCTATGACTTTATGCGCTGGGATTACTGGGCTTT
CGGCATCTCCGGCCTTTTGCTGGTGGCGTCCATAATCATCATGGGCGTACGCGGTTTTAACTGGGGGCTGGATTTTACCG
GTGGTACGGTTATCGAAATTACGCTCGAAAAACCGGTTGAAATTGACGTCATGCGTGACGCATTGCAGAAAGCGGGTTTT
GAAGAGCCGCAACTGCAAAACTTTGGCAGCAGCCATGACATCATGGTCCGTATGCCGCCTGCTGAAGGTGAAACCGGCGG
TCAGGTGCTGGGTAGTAAGGTCGTTACTGTTATTAACGAAGCAACTGACCAGCACGCAGCAGTGAAGCGTATTGAGTTCG
TCGGTCCGAGCGTGGGTGCCGACCTGGCACAAACAGGTGCGATGGCGCTGATGGCCGCGTTGTTATCTATCCTCGTATAC
GTTGGTTTCCGTTTTGAATGGCGACTGGCGGCAGGGGTGGTTATCGCACTGGCGCACGACGTGATCATTACGCTGGGTAT
CTTGTCGTTATTCCATATCGAGGTTGACCTGACCATTGTGGCATCACTGATGTCGGTTATCGGTTACTCGCTTAACGACA
GTATCGTGGTATGTGACCGTATTCGTGAAAACTTCCGCAAGATCCGTCGCGGTACATCTTACGAAATCTTTAACGTGTCA
CTGACTCAGACGTTACACCGTACGTTGATCACATCTGGTACAACCTTAATGGTTATCCTGATGCTGTATCTCTTCGGTGG
TCCGGTGCTGGAAGGCTTCTCGCTGACCATGCTGATTGGTGTTTCCATCGGTACTGCATCTTCTATCTATGTAGCATCAG
CGCTGGCCCTGAAACTGGGTATGAAGCGCGAACATATGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCA
ATTCTGCCTTAA

Upstream 100 bases:

>100_bases
GCGACGTCGATGTTTACTGCGATTGTCGGTACTCGCGCCATCGTAAACCTGCTATATGGCGGCAAACGCGTCAAGAAGCT
GTCAATCTGAGGAGTGCGAT

Downstream 100 bases:

>100_bases
TCAAGTTTCAGCTGATGTTGAAAATCCCGGTCAGAAGATCGGGATTTTTTTTGATGTATGGTGATTGCGAAAACCCCCGC
ATCTTGGGAAACTGCGCGTA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLVASIIIMGVRGFNWGLDFTGGTVIEITLEKPVEIDVMRDALQKAGF
EEPQLQNFGSSHDIMVRMPPAEGETGGQVLGSKVVTVINEATDQHAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY
VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEVDLTIVASLMSVIGYSLNDSIVVCDRIRENFRKIRRGTSYEIFNVS
LTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPS
ILP

Sequences:

>Translated_323_residues
MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLVASIIIMGVRGFNWGLDFTGGTVIEITLEKPVEIDVMRDALQKAGF
EEPQLQNFGSSHDIMVRMPPAEGETGGQVLGSKVVTVINEATDQHAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY
VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEVDLTIVASLMSVIGYSLNDSIVVCDRIRENFRKIRRGTSYEIFNVS
LTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPS
ILP
>Mature_322_residues
AQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLVASIIIMGVRGFNWGLDFTGGTVIEITLEKPVEIDVMRDALQKAGFE
EPQLQNFGSSHDIMVRMPPAEGETGGQVLGSKVVTVINEATDQHAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYV
GFRFEWRLAAGVVIALAHDVIITLGILSLFHIEVDLTIVASLMSVIGYSLNDSIVVCDRIRENFRKIRRGTSYEIFNVSL
TQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSI
LP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=323, Percent_Identity=95.6656346749226, Blast_Score=632, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35383; Mature: 35252

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLVASIIIMGVRGFNWGLDFTGGTVIEI
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEE
TLEKPVEIDVMRDALQKAGFEEPQLQNFGSSHDIMVRMPPAEGETGGQVLGSKVVTVINE
EECCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ATDQHAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH
VIITLGILSLFHIEVDLTIVASLMSVIGYSLNDSIVVCDRIRENFRKIRRGTSYEIFNVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEH
LTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLG
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHC
MKREHMLQQKVEKEGADQPSILP
CCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLVASIIIMGVRGFNWGLDFTGGTVIEI
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEE
TLEKPVEIDVMRDALQKAGFEEPQLQNFGSSHDIMVRMPPAEGETGGQVLGSKVVTVINE
EECCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ATDQHAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH
VIITLGILSLFHIEVDLTIVASLMSVIGYSLNDSIVVCDRIRENFRKIRRGTSYEIFNVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEH
LTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLG
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHC
MKREHMLQQKVEKEGADQPSILP
CCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]