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The map label for this gene is ybeR [H]

Identifier: 218549780

GI number: 218549780

Start: 2524774

End: 2525481

Strand: Reverse

Name: ybeR [H]

Synonym: EFER_2461

Alternate gene names: 218549780

Gene position: 2525481-2524774 (Counterclockwise)

Preceding gene: 218549782

Following gene: 218549779

Centisome position: 55.04

GC content: 46.47

Gene sequence:

>708_bases
ATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCA
TTCATCGCCCAAAATGTATTTAGGTACACGCTTTTTTGACCTTTCTTCCTCCTGGGGAATTGATGACCGTGATGACCTGC
TGCGCACAATTCACCGAATGATCGATAACGGTCATGCTGCGCGGTTGGCTGGTTTTTATCACCGCTGGTTTCGTTATTCA
CCATGTGAATGGCGTAACTATACCAGTGAGTTAAATGAGTCAGGCCAGGCTTACGCGCAGTTTGTCGCCAGCACAGCCGA
ATGTTGTGGCGAAGGCGGTATAAAAGCCTGGGATTATGTCCGTATGGGTTTTTTAAGCCGGATGGGCGTACTTAATAACT
GGCTCAGCGAAGAAGAAAGCCTGTGGATCCAGTCGCGTATTCACCTGCGAGCAATAAACTATTACGCCAACTGGCGGCAA
TATTTCGCAGCATATATTTTTGGGCGACAATACTGGCAGTCTCCCGAGGATGATAATCTGCCTTTATTACGTGAATTCTT
AGCGCGTAAAGAATACGACGATTCCGGCAATGATATGTTTTATCAATTATTTGCCAGTGACGATGCATATTACGCGACCT
TACCCTGGCAACCACTGGCTGACTACCCCACATGTCCGGAAACGCTTAAGGATATGAGCGACCTATGA

Upstream 100 bases:

>100_bases
GTCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAATGAGTCTCGCAATGTAGTTTATATTCATTAAATG
AATATTTAAGGATGGATTAT

Downstream 100 bases:

>100_bases
AAAATTGCTGGAAGATTCTCGAAATAGAGGAAACGACTGACGTCGATATTATCCGCCGCGCTTATCTGGCGCTGTTACCG
TCCTTTCATCCAGAAACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTRFFDLSSSWGIDDRDDLLRTIHRMIDNGHAARLAGFYHRWFRYS
PCEWRNYTSELNESGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRAINYYANWRQ
YFAAYIFGRQYWQSPEDDNLPLLREFLARKEYDDSGNDMFYQLFASDDAYYATLPWQPLADYPTCPETLKDMSDL

Sequences:

>Translated_235_residues
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTRFFDLSSSWGIDDRDDLLRTIHRMIDNGHAARLAGFYHRWFRYS
PCEWRNYTSELNESGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRAINYYANWRQ
YFAAYIFGRQYWQSPEDDNLPLLREFLARKEYDDSGNDMFYQLFASDDAYYATLPWQPLADYPTCPETLKDMSDL
>Mature_235_residues
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTRFFDLSSSWGIDDRDDLLRTIHRMIDNGHAARLAGFYHRWFRYS
PCEWRNYTSELNESGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRAINYYANWRQ
YFAAYIFGRQYWQSPEDDNLPLLREFLARKEYDDSGNDMFYQLFASDDAYYATLPWQPLADYPTCPETLKDMSDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeU [H]

Homologues:

Organism=Escherichia coli, GI1786865, Length=235, Percent_Identity=93.1914893617021, Blast_Score=458, Evalue=1e-130,
Organism=Escherichia coli, GI1786868, Length=235, Percent_Identity=59.5744680851064, Blast_Score=294, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009677 [H]

Pfam domain/function: PF06889 DUF1266 [H]

EC number: NA

Molecular weight: Translated: 27672; Mature: 27672

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTRFFDLSSSWGIDDRDDLLRTIHRM
CCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEECEEEEECCCCCCCCCHHHHHHHHHHH
IDNGHAARLAGFYHRWFRYSPCEWRNYTSELNESGQAYAQFVASTAECCGEGGIKAWDYV
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RMGFLSRMGVLNNWLSEEESLWIQSRIHLRAINYYANWRQYFAAYIFGRQYWQSPEDDNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PLLREFLARKEYDDSGNDMFYQLFASDDAYYATLPWQPLADYPTCPETLKDMSDL
HHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTRFFDLSSSWGIDDRDDLLRTIHRM
CCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEECEEEEECCCCCCCCCHHHHHHHHHHH
IDNGHAARLAGFYHRWFRYSPCEWRNYTSELNESGQAYAQFVASTAECCGEGGIKAWDYV
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RMGFLSRMGVLNNWLSEEESLWIQSRIHLRAINYYANWRQYFAAYIFGRQYWQSPEDDNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PLLREFLARKEYDDSGNDMFYQLFASDDAYYATLPWQPLADYPTCPETLKDMSDL
HHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]