| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yhbX [H]
Identifier: 218549649
GI number: 218549649
Start: 2382232
End: 2383893
Strand: Reverse
Name: yhbX [H]
Synonym: EFER_2324
Alternate gene names: 218549649
Gene position: 2383893-2382232 (Counterclockwise)
Preceding gene: 218549650
Following gene: 218549648
Centisome position: 51.95
GC content: 39.17
Gene sequence:
>1662_bases ATGTCTTCTGTATTACCTTCATTGTCTGTTTATCCACGGCAGAGAAAAATATATCTTTTTTTAGCGCTATTATTTGCTTC AACATTGATTCAACTTTGGCCTTTATATCATTTACAACCTCTCCGGGTAATATTACGTGTTGGTGCATGCAACATGCTAA TTATATTATCTCTGACAGCATGTTATCGCCTGTTGGTGGGGAAAATTTTAGCGCTGGGGGTGTCATTATTACTCACTGTT AATTTTATGATTGCGCTTTGTACATGGGAAATATATCAAAGCGATTTCAATATCGTATTTGCGATGAGTATTCTTGAAAC TCATTGGGCTGAAGTTAAATCGATGACGGGTATGTATATTTCATGGATGCCGGTATGCGTCATTTATTTTCTATTGACAT ATTTCTCCATACACAATGGTGCAAAATGTCTCTCTTCTAAAATTCAACGCGCCGCAATGGTCATATTATTGATTTTTCTG GCATGGTTTACTTACAGTCAATGGAAAAAACAGCAGAAAGATGGTCTTGGCGGCTATTATCCTTTAAGCGCTCGCGCATT AAAAGTTACACCATTTTACGTTGCTTCAAATTTTATTGTTGCATACCGTGACATTGCTTTTGCAAAAGAGCTAAAGCAGA TTGATATAGATTTACCGGGGTTAACGACTAAAGACACTGATATTGATACCTATGTAATCATTATTGGTGAGTCTGCACGT CGCAGTAATATGAGCTTGTATGGTTTCGAACAGAATACTACGCCCGTACAAAATACAATCGCACCGCAGGCACTAATTTT TGATAACGCTATTTCACCTGCGGCGGCGACAGTGACTTCGATTCCAATGATTCTCAGTAAGGCATCAACAGAAAGTTTTA CTGCTGCCGATTTATCAAACAATATTGTTACGTTAGCTAATAAAGCTGGTTTTCAAACAACATGGCTGAGTACACAGAAT GTTGTGGGTAAACATAATAACTACATTACCCTTATCGGAAGTGCCAGCAATAAATCGCAGTGGATGACAGGTGAATATGA CGATGCCCTTTTACCCCATCTTGATGAAGCCTTAAAAGAAAAAGGTAAAAAACTCATCATGTTGCACATCAATGGTAGTC ATGAAATTGCCTGTACGCGTTATCCTGAATGGGCAGATAAATTCAAAACTGGCAATAAATATGAGGATTGCTACAACAAC TCTATATTGTTCACTGATTATGTTATTGGTGAGGTCATAAAGCGTCTTGAAGGTAGTAAATCCTCATTGCTTTATTTTTC TGATCATGGCCTGGAAAAAAATCCTGATATTCCGTCACTTTATATGCATGGCGCAGATACACCAAGTAAAGAAGCCTACG ATGTACCGCAATTTATCTGGTACAGTTCTGAGGCATTGAACAGTCAATCGCGTAAGCTTGGTCATATTCGTGAGAACTAT TCGTTGCTCAATAACTATGCAATGATGCTTGACTGGCTGGGCATTTCCACTGGCGAAACACGGTGCAACTCTCCGTTGTC TGAATGTTATCGTCCTGCGACATCTATCCCTGTAACGGACGGTAGTCGAGCTAAAGTCTTTGAATATAAAGATCTGCGTG ATACCTTTGCCTCACCGAAGAAAAAGATTCCTTATCGCGAAGCCAGTCCTAATCCGCTGTAA
Upstream 100 bases:
>100_bases ATAAATTACTAACTCGCTGAAGTTTTGTTGCGACATTGTTATTTTATTGAAAATGTCGAACATTGAACATACATTCATGA AAAAAATGGATTAATTCTCT
Downstream 100 bases:
>100_bases ATTAATGTCTGGGGAGCATCGTCAGGTGCTCCCTGATTCTTATTCAAAATACACCAGACAAGTGCCAGACCATAAAATAC GTTTTACCACATGGCGGTTG
Product: transmembrane protein (N-terminal); phosphatase (C-terminal)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MSSVLPSLSVYPRQRKIYLFLALLFASTLIQLWPLYHLQPLRVILRVGACNMLIILSLTACYRLLVGKILALGVSLLLTV NFMIALCTWEIYQSDFNIVFAMSILETHWAEVKSMTGMYISWMPVCVIYFLLTYFSIHNGAKCLSSKIQRAAMVILLIFL AWFTYSQWKKQQKDGLGGYYPLSARALKVTPFYVASNFIVAYRDIAFAKELKQIDIDLPGLTTKDTDIDTYVIIIGESAR RSNMSLYGFEQNTTPVQNTIAPQALIFDNAISPAAATVTSIPMILSKASTESFTAADLSNNIVTLANKAGFQTTWLSTQN VVGKHNNYITLIGSASNKSQWMTGEYDDALLPHLDEALKEKGKKLIMLHINGSHEIACTRYPEWADKFKTGNKYEDCYNN SILFTDYVIGEVIKRLEGSKSSLLYFSDHGLEKNPDIPSLYMHGADTPSKEAYDVPQFIWYSSEALNSQSRKLGHIRENY SLLNNYAMMLDWLGISTGETRCNSPLSECYRPATSIPVTDGSRAKVFEYKDLRDTFASPKKKIPYREASPNPL
Sequences:
>Translated_553_residues MSSVLPSLSVYPRQRKIYLFLALLFASTLIQLWPLYHLQPLRVILRVGACNMLIILSLTACYRLLVGKILALGVSLLLTV NFMIALCTWEIYQSDFNIVFAMSILETHWAEVKSMTGMYISWMPVCVIYFLLTYFSIHNGAKCLSSKIQRAAMVILLIFL AWFTYSQWKKQQKDGLGGYYPLSARALKVTPFYVASNFIVAYRDIAFAKELKQIDIDLPGLTTKDTDIDTYVIIIGESAR RSNMSLYGFEQNTTPVQNTIAPQALIFDNAISPAAATVTSIPMILSKASTESFTAADLSNNIVTLANKAGFQTTWLSTQN VVGKHNNYITLIGSASNKSQWMTGEYDDALLPHLDEALKEKGKKLIMLHINGSHEIACTRYPEWADKFKTGNKYEDCYNN SILFTDYVIGEVIKRLEGSKSSLLYFSDHGLEKNPDIPSLYMHGADTPSKEAYDVPQFIWYSSEALNSQSRKLGHIRENY SLLNNYAMMLDWLGISTGETRCNSPLSECYRPATSIPVTDGSRAKVFEYKDLRDTFASPKKKIPYREASPNPL >Mature_552_residues SSVLPSLSVYPRQRKIYLFLALLFASTLIQLWPLYHLQPLRVILRVGACNMLIILSLTACYRLLVGKILALGVSLLLTVN FMIALCTWEIYQSDFNIVFAMSILETHWAEVKSMTGMYISWMPVCVIYFLLTYFSIHNGAKCLSSKIQRAAMVILLIFLA WFTYSQWKKQQKDGLGGYYPLSARALKVTPFYVASNFIVAYRDIAFAKELKQIDIDLPGLTTKDTDIDTYVIIIGESARR SNMSLYGFEQNTTPVQNTIAPQALIFDNAISPAAATVTSIPMILSKASTESFTAADLSNNIVTLANKAGFQTTWLSTQNV VGKHNNYITLIGSASNKSQWMTGEYDDALLPHLDEALKEKGKKLIMLHINGSHEIACTRYPEWADKFKTGNKYEDCYNNS ILFTDYVIGEVIKRLEGSKSSLLYFSDHGLEKNPDIPSLYMHGADTPSKEAYDVPQFIWYSSEALNSQSRKLGHIRENYS LLNNYAMMLDWLGISTGETRCNSPLSECYRPATSIPVTDGSRAKVFEYKDLRDTFASPKKKIPYREASPNPL
Specific function: Involved In Adherence (By Similarity). [C]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family [H]
Homologues:
Organism=Escherichia coli, GI87082223, Length=550, Percent_Identity=32.7272727272727, Blast_Score=261, Evalue=1e-70, Organism=Escherichia coli, GI1787035, Length=536, Percent_Identity=25.9328358208955, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1790392, Length=463, Percent_Identity=24.8380129589633, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI87082372, Length=302, Percent_Identity=25.8278145695364, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI87082286, Length=442, Percent_Identity=23.9819004524887, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 62315; Mature: 62183
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVLPSLSVYPRQRKIYLFLALLFASTLIQLWPLYHLQPLRVILRVGACNMLIILSLTA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHH CYRLLVGKILALGVSLLLTVNFMIALCTWEIYQSDFNIVFAMSILETHWAEVKSMTGMYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHH SWMPVCVIYFLLTYFSIHNGAKCLSSKIQRAAMVILLIFLAWFTYSQWKKQQKDGLGGYY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE PLSARALKVTPFYVASNFIVAYRDIAFAKELKQIDIDLPGLTTKDTDIDTYVIIIGESAR CCCCCEEEEEEEEECCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCC RSNMSLYGFEQNTTPVQNTIAPQALIFDNAISPAAATVTSIPMILSKASTESFTAADLSN CCCCEEEEECCCCCCHHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHCCCCCEEHHHCCC NIVTLANKAGFQTTWLSTQNVVGKHNNYITLIGSASNKSQWMTGEYDDALLPHLDEALKE CEEEEECCCCCEEEEECHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH KGKKLIMLHINGSHEIACTRYPEWADKFKTGNKYEDCYNNSILFTDYVIGEVIKRLEGSK CCCEEEEEEECCCCCEEEECCCHHHHHHCCCCCHHHHHCCCEEEHHHHHHHHHHHHCCCC SSLLYFSDHGLEKNPDIPSLYMHGADTPSKEAYDVPQFIWYSSEALNSQSRKLGHIRENY CEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHEECHHHHCHHHHHHHHHHHHH SLLNNYAMMLDWLGISTGETRCNSPLSECYRPATSIPVTDGSRAKVFEYKDLRDTFASPK HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCH KKIPYREASPNPL HCCCCCCCCCCCC >Mature Secondary Structure SSVLPSLSVYPRQRKIYLFLALLFASTLIQLWPLYHLQPLRVILRVGACNMLIILSLTA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHH CYRLLVGKILALGVSLLLTVNFMIALCTWEIYQSDFNIVFAMSILETHWAEVKSMTGMYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHH SWMPVCVIYFLLTYFSIHNGAKCLSSKIQRAAMVILLIFLAWFTYSQWKKQQKDGLGGYY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE PLSARALKVTPFYVASNFIVAYRDIAFAKELKQIDIDLPGLTTKDTDIDTYVIIIGESAR CCCCCEEEEEEEEECCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCC RSNMSLYGFEQNTTPVQNTIAPQALIFDNAISPAAATVTSIPMILSKASTESFTAADLSN CCCCEEEEECCCCCCHHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHCCCCCEEHHHCCC NIVTLANKAGFQTTWLSTQNVVGKHNNYITLIGSASNKSQWMTGEYDDALLPHLDEALKE CEEEEECCCCCEEEEECHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH KGKKLIMLHINGSHEIACTRYPEWADKFKTGNKYEDCYNNSILFTDYVIGEVIKRLEGSK CCCEEEEEEECCCCCEEEECCCHHHHHHCCCCCHHHHHCCCEEEHHHHHHHHHHHHCCCC SSLLYFSDHGLEKNPDIPSLYMHGADTPSKEAYDVPQFIWYSSEALNSQSRKLGHIRENY CEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHEECHHHHCHHHHHHHHHHHHH SLLNNYAMMLDWLGISTGETRCNSPLSECYRPATSIPVTDGSRAKVFEYKDLRDTFASPK HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCH KKIPYREASPNPL HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]