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The map label for this gene is ybiM [H]

Identifier: 218549627

GI number: 218549627

Start: 2360095

End: 2360499

Strand: Direct

Name: ybiM [H]

Synonym: EFER_2302

Alternate gene names: 218549627

Gene position: 2360095-2360499 (Clockwise)

Preceding gene: 218549625

Following gene: 218549628

Centisome position: 51.43

GC content: 46.67

Gene sequence:

>405_bases
ATGCATGTCATTGATTTGTCTTATTTTGTAAAAATATATCGTTCAAAAAATAAGCACATCTCTGTCAATTTTTTGCGTCA
TTTGCATCGCGCAGGCGACCTACACTTATCAGGCACTACCCGTTGTATTTATGAGGATGTCATTATGAAAAAGTGCCTCA
CACTACTGATTGCCACCGTCCTGAGCGGGCTCTCTCTCACGGCTTATGCCGCGCAACCAATGAGTAACCTGGACAGCGGT
CAGCTACGGCCCGCCGGTACCGTTTCAGCAACTGGCGCATCAAACCTAAGCGATCTGGAGGATAAACTGGCAGAAAAAGC
GCGCGAACAAGGCGCGAAAGGTTATGTCATTAATTCCGCAGGCGGAAATGACCAGATGTTCGGTACTGCAACCATCTACA
AATAA

Upstream 100 bases:

>100_bases
ACCCGCATAACGCGACAGGGTAAATATCTGGCTGCGTTTATCATTCTCCAAACCTTGACATGACTATGGTTTATGGCAAT
TCACCATAAAAATCAGCACC

Downstream 100 bases:

>100_bases
CCCCACCAACGTAACTGCATTCGCCTCTGGATGCAGTTTTCGCCTGTTTTGTAATCAAAAAACATCAAATATGAACTTAA
TGTAAATAAATGTATTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHVIDLSYFVKIYRSKNKHISVNFLRHLHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGLSLTAYAAQPMSNLDSG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK

Sequences:

>Translated_134_residues
MHVIDLSYFVKIYRSKNKHISVNFLRHLHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGLSLTAYAAQPMSNLDSG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK
>Mature_134_residues
MHVIDLSYFVKIYRSKNKHISVNFLRHLHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGLSLTAYAAQPMSNLDSG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK

Specific function: Affects biofilm formation and mucoidy [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=98.8372093023256, Blast_Score=174, Evalue=2e-45,
Organism=Escherichia coli, GI1787355, Length=86, Percent_Identity=43.0232558139535, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 14576; Mature: 14576

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVIDLSYFVKIYRSKNKHISVNFLRHLHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATV
CEEEHHHHHHHHHHCCCCEEEHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LSGLSLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSA
HCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
GGNDQMFGTATIYK
CCCCCCEEEEEECC
>Mature Secondary Structure
MHVIDLSYFVKIYRSKNKHISVNFLRHLHRAGDLHLSGTTRCIYEDVIMKKCLTLLIATV
CEEEHHHHHHHHHHCCCCEEEHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LSGLSLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSA
HCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
GGNDQMFGTATIYK
CCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]