Click here to switch to the map view.

The map label for this gene is yejK [C]

Identifier: 218549603

GI number: 218549603

Start: 2338117

End: 2339121

Strand: Reverse

Name: yejK [C]

Synonym: EFER_2278

Alternate gene names: 218549603

Gene position: 2339121-2338117 (Counterclockwise)

Preceding gene: 218549609

Following gene: 218549602

Centisome position: 50.98

GC content: 52.24

Gene sequence:

>1005_bases
ATGAGTCTGGATATCAACCAGATTGCCCTGCACCAGCTTATCAAGCGCGATGAGCAAAATCTTGAGCTGGTCCTGCGCGA
TTCATTACTGGAACCGACTGACACCGTTAGCGAAATGGTGGCGGAACTTCATCGTGTTTACAGCGCCAAGAATAAAGCAT
ATGGCCTGTTCAGCGAAGAGAGTGAACTGGCGCAGGCTCTGCGTTTGCAGCGGCAGGGGGAGGAGGATTTCCTCGCCTTT
AGCCGGGCAGCAACCGGGCGACTGCGTGACGAACTGGCAAAGTATCCCTTTGCCGATGGTGGTTTTGTGCTGTTTTGCCA
CTATCGTTATCTGGCGGTTGAGTATTTGCTAATTTGCGTGCTGAACAATTTAAGCAGTATGCGTGTTAATGAAAATCTCG
ACATTAACCCGACCCATTATCTCGATATCAATCATGCTGATATCGTTGCACGCATCGATTTAACCGAATGGGAAACCAAC
CCGGAATCAACGCGCTACCTGACTTTCCTGAAAGGGCGAGTAGGGCGCAAAGTAGCGGATTTCTTTATGGATTTCCTTGG
TGCCAGCGAAGGGTTGAATGCGAAAGCGCAAAACCGTGGTCTGTTACAGGCGGTCGATGATTTCACTGCCGAAGCACAAC
TGGATAAAGCAGAACGACAGAACGTGCGCCAGCAGGTCTATAGCTACTGTAATGAGCAATTGCAGGCGGGCGAAGAGATC
GAGCTGGAATCGCTGTCGAAAGAACTGGCGGGCGTCAGCGAAGTGAGCTTCACGGAATTTGCGGCGGAAAAAGGCTACGA
ACTGGAAGAGAGCTTCCCGGCAGACCGCAGCACGCTGCGTCAGTTGACGAAGTTTGCCGGTAGCGGCGGAGGCTTAACCA
TTAACTTTGATGCGATGCTGTTAGGTGAGCGTATTTTCTGGGACCCGGCGACCGATACCCTGACCATTAAAGGCACGCCG
CCGAACCTGCGCGATCAATTGCAGCGCCGGACGTCTGGCAACTAA

Upstream 100 bases:

>100_bases
ATACGTATTACAGACCAGGGTGCAAAATGACGGCCTTCGGCGGTTGCGTCGCCTCGCGGGTGGTGGTTGAATACCGCCCG
GTCTTAAAGGAGAGTTTATC

Downstream 100 bases:

>100_bases
TCTCGACCTTTCACTACTCTTCATACTTCAAGTTGCATGCGCTAAGCGCCATCTGGAATGATCCGATGGCGCTCTAAACT
GCATACTGTGAATTGTTCTG

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTDTVSEMVAELHRVYSAKNKAYGLFSEESELAQALRLQRQGEEDFLAF
SRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLICVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTSGN

Sequences:

>Translated_334_residues
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTDTVSEMVAELHRVYSAKNKAYGLFSEESELAQALRLQRQGEEDFLAF
SRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLICVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTSGN
>Mature_333_residues
SLDINQIALHQLIKRDEQNLELVLRDSLLEPTDTVSEMVAELHRVYSAKNKAYGLFSEESELAQALRLQRQGEEDFLAFS
RAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLICVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNP
ESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIE
LESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPP
NLRDQLQRRTSGN

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=333, Percent_Identity=97.8978978978979, Blast_Score=671, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 37784; Mature: 37653

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTDTVSEMVAELHRVYSAKNKAYGLFSEE
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLICV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
LNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD
HHCHHHCEECCCCCCCCCEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHH
FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML
CHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH
LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGN
HCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SLDINQIALHQLIKRDEQNLELVLRDSLLEPTDTVSEMVAELHRVYSAKNKAYGLFSEE
CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLICV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
LNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD
HHCHHHCEECCCCCCCCCEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHH
FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML
CHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH
LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGN
HCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA