| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yeiJ [H]
Identifier: 218549574
GI number: 218549574
Start: 2305430
End: 2306680
Strand: Reverse
Name: yeiJ [H]
Synonym: EFER_2246
Alternate gene names: 218549574
Gene position: 2306680-2305430 (Counterclockwise)
Preceding gene: 218549575
Following gene: 218549570
Centisome position: 50.27
GC content: 50.68
Gene sequence:
>1251_bases ATGGATGTCATGAGAAGTGTTCTGGGAATGGTGGTACTGCTGGCAATTGCGTTTTTGCTGTCAGTAAACAAGAAGAAGAT CAGCCTGCGTACCGTTGGCGCGGCGTTAGTGTTACAGGTCGTGATTGGCGGCATTATGCTTTGGTTACCGCCAGGGCGTT GGGTCGCAGAAAAAGTCGCTTTTGGCGTGCATAAAGTGATGGCGTACAGCGATGCAGGTAGCGCATTTATCTTCGGTTCT CTGGTCGGACCGAAAATGGACACCTTATTTGATGGTGCAGGATTTATCTTTGGTTTCAGGGTATTACCGGCAATTATCTT CGTCACTGCACTGGTGAGTATTCTCTACTACATCGGTGTGATGGGGATCTTAATTCGCATTCTCGGCGGTATCTTCCAGA AAGCTTTAAATATCAGCAAGATCGAGTCATTCGTCGCGGTCACTACCATTTTCCTCGGGCAAAACGAAATTCCGGCAATC GTCAAACCCTTTATCGATCGTCTGAATCGCAATGAATTATTTACAGCGATTTGTAGCGGGATGGCCTCGATTGCTGGTTC GACAATGATTGGTTACGCCGCACTGGGCGTGCCTGTGGAATATCTGCTGGCGGCATCGTTAATGGCTATCCCTGGCGGGA TCTTGTTTGCCCGCATGTTAAGTCCGGCTACGGAATCTTCGCAGGTTTCCTTTAATAACCTCTCTTTCACCGAAACACCG CCAAAAAGCATTATTGAAGCCGCCGCTACAGGGGCAATGACCGGGCTGAAAATCGCCGCAGGTGTGGCGACAGTGGTGAT GGCATTTGTTGCCATCATTGCGTTGATTAACGGTATTATCGGCGGCGTTGGCGGTTGGTTTGGTTTTGAACATGCCTCGC TGGAGTCCATTTTAGGTTACCTGTTGGCTCCACTGGCGTGGGTGATGGGGGTTGACTGGAGTGATGCGAATCTTGCCGGG AGTTTGATTGGACAGAAGCTGGCGATTAATGAATTTGTCGCTTACCTCAATTTCTCACCTTATCTGCAAACAGCTGGCAC TCTGGATGCTAAAACCGTGGCGATTATTTCCTTCGCGTTGTGCGGTTTCGCTAACTTTGGTTCTATCGGGGTGGTGGTTG GCGCATTTTCTGCGGTTGCGCCACACCGTGCGCCGGAAATCGCCCAGCTTGGTTTACGGGCGCTGGCGGCGGCGACACTT TCTAACCTGATGAGTGCGACCATTGCCGGGTTCTTTATTGGGCTGGCGTAG
Upstream 100 bases:
>100_bases AGTGTTGATAACAAGCTGGGACAGTATCGCAAGATGCAGGCCCGGCTATTTCTGATGGGCAGAAAGCCGTCGCCCAAAAT GACATGAAGAGATAATAACT
Downstream 100 bases:
>100_bases TGCACAATTTGTATGCCGGATAAGACATTCTAAGCGTCGTATCCGGCATCATATTCAGGCCATCTGCAACAAATAAAGCG CGTTATCGGCAGACAGGGTA
Product: sodium/proton nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGS LVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARMLSPATESSQVSFNNLSFTETP PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGYLLAPLAWVMGVDWSDANLAG SLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATL SNLMSATIAGFFIGLA
Sequences:
>Translated_416_residues MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGS LVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARMLSPATESSQVSFNNLSFTETP PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGYLLAPLAWVMGVDWSDANLAG SLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATL SNLMSATIAGFFIGLA >Mature_416_residues MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGS LVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARMLSPATESSQVSFNNLSFTETP PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGYLLAPLAWVMGVDWSDANLAG SLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATL SNLMSATIAGFFIGLA
Specific function: Nucleoside transporter [H]
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=415, Percent_Identity=33.0120481927711, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI42542381, Length=422, Percent_Identity=31.2796208530806, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI227116277, Length=419, Percent_Identity=30.0715990453461, Blast_Score=208, Evalue=8e-54, Organism=Escherichia coli, GI1788485, Length=416, Percent_Identity=99.5192307692308, Blast_Score=810, Evalue=0.0, Organism=Escherichia coli, GI1788488, Length=416, Percent_Identity=88.4615384615385, Blast_Score=699, Evalue=0.0, Organism=Escherichia coli, GI1788737, Length=414, Percent_Identity=31.8840579710145, Blast_Score=190, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17560276, Length=396, Percent_Identity=29.040404040404, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI71991794, Length=399, Percent_Identity=32.0802005012531, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI25146537, Length=243, Percent_Identity=29.2181069958848, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI45552517, Length=408, Percent_Identity=31.8627450980392, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI19921868, Length=408, Percent_Identity=31.8627450980392, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI45552519, Length=408, Percent_Identity=31.8627450980392, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI281360430, Length=407, Percent_Identity=32.9238329238329, Blast_Score=207, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 43398; Mature: 43398
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVA CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH FGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGV HHHHHHHHCCCCCCEEEEHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH MASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARMLSPATESSQVSFNNLSFTETP HHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCCCCC PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFAL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHH CGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA HCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVA CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH FGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGV HHHHHHHHCCCCCCEEEEHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH MASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARMLSPATESSQVSFNNLSFTETP HHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCCCCC PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFAL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHH CGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA HCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]