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The map label for this gene is yohK [H]

Identifier: 218549555

GI number: 218549555

Start: 2283724

End: 2284419

Strand: Direct

Name: yohK [H]

Synonym: EFER_2227

Alternate gene names: 218549555

Gene position: 2283724-2284419 (Clockwise)

Preceding gene: 218549554

Following gene: 218549556

Centisome position: 49.77

GC content: 49.28

Gene sequence:

>696_bases
ATGATGGCGTATATCTGGTGGTCATTACCACTGACCTTGATCGTCTTTTTCGCCGCACGCAAACTGGCGGCTCGCTTTAA
AATTCCATTATTAAATCCATTGTTAGTGGCAATGGTGGTCATTATTCCTTTTCTGCTACTGACAGGTATTCCGTACGATC
ACTACTTTAAAGGCAGCGAAATATTAAACGATCTGCTGCAACCTGCTGTTGTGGCATTGGCTTATCCTTTATATGAGCAA
CTTCACCAGATCCGCGCACGCTGGAAATCGATCATCACGATTTGTTTTATTGGTAGTGTCGTGGCAATGGTCACCGGGAC
CACGGTTGCCTTGCTGATGGGTGCTACACCTGAAATTGCGGCCTCTGTATTACCGAAATCCGTTACCACGCCTATCGCAA
TGGCTGTTGGCGGTAGCATCGGAGGCATCCCGGCCGTGAGCGCGGTTTGCGTGATTTTTGTCGGTATTCTTGGCGCAGTA
TTTGGTCACACGTTACTGAATGCCATGCGTATTCGCACTAAAGCCGCTCGTGGTCTGGCAATGGGTACAGCTTCCCACGC
ATTAGGAACCGCACGTTGTGCAGAGCTGGATTATCAGGAAGGCGCCTTTAGTTCGCTGGCGCTGGTGATTTGCGGGATTA
TCACATCGGTGGTTGCACCGTTTATTTTCCCGATCATTCTGGCGGTAGTAGGATAA

Upstream 100 bases:

>100_bases
CCTGCGCAATTAGCACCCTGGTGGTGTTCTTAGTTGTTAGCTGGAGTTCGCAGCTAGTGCATGGCGAACGAAAAGTGGTT
GGGCAAAAGGGTTCGAAAGA

Downstream 100 bases:

>100_bases
AATTTGCGATACGTCGCACATTTTTGATACGTGTTTCATATGTTGCACATTTAATGAGATTCAGATCACATATAAAGATA
GGGTGGGTTCGTAAACTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MMAYIWWSLPLTLIVFFAARKLAARFKIPLLNPLLVAMVVIIPFLLLTGIPYDHYFKGSEILNDLLQPAVVALAYPLYEQ
LHQIRARWKSIITICFIGSVVAMVTGTTVALLMGATPEIAASVLPKSVTTPIAMAVGGSIGGIPAVSAVCVIFVGILGAV
FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVICGIITSVVAPFIFPIILAVVG

Sequences:

>Translated_231_residues
MMAYIWWSLPLTLIVFFAARKLAARFKIPLLNPLLVAMVVIIPFLLLTGIPYDHYFKGSEILNDLLQPAVVALAYPLYEQ
LHQIRARWKSIITICFIGSVVAMVTGTTVALLMGATPEIAASVLPKSVTTPIAMAVGGSIGGIPAVSAVCVIFVGILGAV
FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVICGIITSVVAPFIFPIILAVVG
>Mature_231_residues
MMAYIWWSLPLTLIVFFAARKLAARFKIPLLNPLLVAMVVIIPFLLLTGIPYDHYFKGSEILNDLLQPAVVALAYPLYEQ
LHQIRARWKSIITICFIGSVVAMVTGTTVALLMGATPEIAASVLPKSVTTPIAMAVGGSIGGIPAVSAVCVIFVGILGAV
FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVICGIITSVVAPFIFPIILAVVG

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=231, Percent_Identity=93.0735930735931, Blast_Score=434, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24465; Mature: 24465

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAYIWWSLPLTLIVFFAARKLAARFKIPLLNPLLVAMVVIIPFLLLTGIPYDHYFKGSE
CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHH
ILNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTTVALLMGATPEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ASVLPKSVTTPIAMAVGGSIGGIPAVSAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLA
HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGTASHALGTARCAELDYQEGAFSSLALVICGIITSVVAPFIFPIILAVVG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMAYIWWSLPLTLIVFFAARKLAARFKIPLLNPLLVAMVVIIPFLLLTGIPYDHYFKGSE
CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHH
ILNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTTVALLMGATPEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ASVLPKSVTTPIAMAVGGSIGGIPAVSAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLA
HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGTASHALGTARCAELDYQEGAFSSLALVICGIITSVVAPFIFPIILAVVG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]