| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549516
Identifier: 218549516
GI number: 218549516
Start: 2231280
End: 2233853
Strand: Reverse
Name: 218549516
Synonym: EFER_2187
Alternate gene names: NA
Gene position: 2233853-2231280 (Counterclockwise)
Preceding gene: 218549517
Following gene: 218549515
Centisome position: 48.68
GC content: 40.44
Gene sequence:
>2574_bases ATGATACCTGTCGAACTGATTCGCCAAAAAGATTATCCAGCCATTGTTGATTGGGGATTGTCATTAACCGAAAATGAGCG AATTATTGCCTTAAAGGAATTGCAGAACTTTGATTATATTTCACTTCGTCTGGGGGAACATGTTGACGATGCAATCCCTT TGACAAAAATCGTTTGTACGCGTAGTTATGCAGATCAAAAAATGTTTCCTGTTAGCTGGCCAGTGAAACATACGTTACTT CATATGGTTAGTAGAAGTCGTTACCATGCTATACATGATGCGCTAATCACTTATTTTACTCACTGCCCTCCTGATTATCT GGATAGCGTGTTTGAGGATTGTTTGCGCGTTCCACATACATATCCAGATATCCGTCTTATCTGGCGTTGGTTTCAGCAAG GCTGGATTACCTTCAACGAAGCAGCGTTTGCCAACGTGTTATTTCATGTTGAGATGTATACTCGCAACGTTCAGGATGAA ATTATCTGGCTGCGGGATAACCCTCAAGTCATAGAAAAGGTAATTTTACCGTTCACGCAATATGACGTCCCTGTGCTTTT GCGAAGTCACTTTCATCAGGCCGATAACACGCATCATTGTGGTGTCGTTACCGAGTTTTGGGATGAAGTGTTTAAGCAAC TGTTCGCTGAAAATCTTTTGCCACGACAGCTCATTAAAGAACTGTTAGCTTCATTAACAAATAATTTTAAAAAAGGTCGC CTTGACTGGCATATTCGTCTGATAAAAATGTTTAAACCACAAGAAGATGAATGGATTGATAACCAACAGTTATTATTTTC AGGATTAAGTGCCAGCAATAATTCGGTCGTCAATTTTGTTATTCAGACAATTCAAACAATTTACTCTCACCCTGAGTTCG ACCATTCATCATTTATGCAGTGTTTACCGGTGATTAGCGGGCGCGAAAAATGCGATAAATCATTATTAATAGCACTGGAT ATTGCCGGGGATTTGGCAGTACGTTATCCCCAATACCGTACAACACTGGCGCAAAACATCTCTGGAGCCTTGATTCAGCG TAGCGAAAAATTACAACTACGCACTGCCGAATTAATGTTGAAATACCAGGCAGCACAGGACGTTGCCGCGTTAGCTGAGC CATGGTTGGCGGGCTTAAAGCACAGTGTACTGGCACTGTTACAATGTGATTCACCGCTGGGCGAAAGTCATGTTATTCCC ATGCTACAACATGAGCAGGTTATTGTTCCTGAAAACTGGGATGCGTTGTTGTTTCAAACTGGAAAAATGTTGGAAAATAA AGAAGCTCTGGATATTGAGCTTTTTTATGCCGGGATTATTGCTCTGCAAGATGAACTTCCTGCTGGGTATAAAAAACAAT TACAACCGTACTATAAAAAATCACATAAAAAGTATCTCGAATCATCAATACTTTATTGCCTGAGAGATTTTTTTCAGCAA TGGTTTGACGATGAATATGCATCAACGCCAGAGTGGCATGAACGCCGCCTTCCACATTTACAAAACCAAAACCAATTGGT ACTGACACGGTTGCGTGATAACTGCCACTTAAGTTTACTGGCAACACCAAGCCACACGCCGTTCTATGTTTCGCCACAAA TCCTGGTGGAGAGATTGTTGGCCCACGAACGCGAGAATTATCCGGTTGATGTTGATGATTTAATTGTCGCCTGTAATCGT ATTTTGCCAGGCGAGGTTACCGAAGAAGTGAAGCAACAGGCATTAATCTTAACCGGGAAATACGCCCAGGCGGTGCACTA TTTGTTGGGGATCACAGATGATATATCGGCAACAAATGACGAGTATTTACCACTCTGGACACAGATTACACGTACCCGAG ATGCAAACGGAGTATTCCCACAATATGAATCTATCGCCAAAGAGCAGGCGAGTTGGCCTGGCATAGCCCAACCATTTACC TGTACGTATTGCATATTAATTGATAAGAATGAATATAAAACCTGGTACAGACTGGCATTAAATAACCGTGTGCTTTATCA CTGGGAGAGAGAGAGTATTCACCATTATCCTTGTCATTATTACTATATGAGTCTCCGTATTGATGAGTGTTGTCACTGGA AGGACATATTGTATTATTTATCTCTGGTGCCACATTACCCGGATTCTTGGTTAAATCTCTTTATTCCAGCGACGGCATCG GGAAACGAAGTCGATGGCTTTGAAGAATGCTTATATCCTCTACAATATTTGCTTGAAAACCAACTTCGTGTTCATCAGGC AGGTTGGATCTACATTGCAGTTTGTTTACTTTTTGAGAAAAAGATTAGCCGCGATTTGGCAGCAGAATATATACAATTGG CTATCCAACATAACTTTGTAGACAGTCACTATCTGTCTGAATGTATTGCTTATTTACTTATGAATAAGTATGCGCCGATT AATAGATTTATTGAATATCTTGATAACCACAATAGTGATCCAGCAATACGAAAATTCCAAAAGAAAATTCTGGAGAATTG CATCACTCAGGCTGGTGACAACGATCTGCCCATTAATTATAAAAAATTAATAGCTAACCTTAATGAATTAACTGTACAAG GATGTGTGAAATGA
Upstream 100 bases:
>100_bases ACATTCACGAAGTAAACATCAAAAATCAGAATTTCGGGGGCTGATAAAACAGGTGTTCAACCCGGTATCATGAATAATAC TCCATGGAAGAGACTCGCCA
Downstream 100 bases:
>100_bases TCGATTTTAAAGAAAAATACAGTAATATTATTGAATCGGGAAATTCAGAGCAATTAATAGCTTTATTAAAAGTACTGAAT GAACAGTCTCGAAAAGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 857; Mature: 857
Protein sequence:
>857_residues MIPVELIRQKDYPAIVDWGLSLTENERIIALKELQNFDYISLRLGEHVDDAIPLTKIVCTRSYADQKMFPVSWPVKHTLL HMVSRSRYHAIHDALITYFTHCPPDYLDSVFEDCLRVPHTYPDIRLIWRWFQQGWITFNEAAFANVLFHVEMYTRNVQDE IIWLRDNPQVIEKVILPFTQYDVPVLLRSHFHQADNTHHCGVVTEFWDEVFKQLFAENLLPRQLIKELLASLTNNFKKGR LDWHIRLIKMFKPQEDEWIDNQQLLFSGLSASNNSVVNFVIQTIQTIYSHPEFDHSSFMQCLPVISGREKCDKSLLIALD IAGDLAVRYPQYRTTLAQNISGALIQRSEKLQLRTAELMLKYQAAQDVAALAEPWLAGLKHSVLALLQCDSPLGESHVIP MLQHEQVIVPENWDALLFQTGKMLENKEALDIELFYAGIIALQDELPAGYKKQLQPYYKKSHKKYLESSILYCLRDFFQQ WFDDEYASTPEWHERRLPHLQNQNQLVLTRLRDNCHLSLLATPSHTPFYVSPQILVERLLAHERENYPVDVDDLIVACNR ILPGEVTEEVKQQALILTGKYAQAVHYLLGITDDISATNDEYLPLWTQITRTRDANGVFPQYESIAKEQASWPGIAQPFT CTYCILIDKNEYKTWYRLALNNRVLYHWERESIHHYPCHYYYMSLRIDECCHWKDILYYLSLVPHYPDSWLNLFIPATAS GNEVDGFEECLYPLQYLLENQLRVHQAGWIYIAVCLLFEKKISRDLAAEYIQLAIQHNFVDSHYLSECIAYLLMNKYAPI NRFIEYLDNHNSDPAIRKFQKKILENCITQAGDNDLPINYKKLIANLNELTVQGCVK
Sequences:
>Translated_857_residues MIPVELIRQKDYPAIVDWGLSLTENERIIALKELQNFDYISLRLGEHVDDAIPLTKIVCTRSYADQKMFPVSWPVKHTLL HMVSRSRYHAIHDALITYFTHCPPDYLDSVFEDCLRVPHTYPDIRLIWRWFQQGWITFNEAAFANVLFHVEMYTRNVQDE IIWLRDNPQVIEKVILPFTQYDVPVLLRSHFHQADNTHHCGVVTEFWDEVFKQLFAENLLPRQLIKELLASLTNNFKKGR LDWHIRLIKMFKPQEDEWIDNQQLLFSGLSASNNSVVNFVIQTIQTIYSHPEFDHSSFMQCLPVISGREKCDKSLLIALD IAGDLAVRYPQYRTTLAQNISGALIQRSEKLQLRTAELMLKYQAAQDVAALAEPWLAGLKHSVLALLQCDSPLGESHVIP MLQHEQVIVPENWDALLFQTGKMLENKEALDIELFYAGIIALQDELPAGYKKQLQPYYKKSHKKYLESSILYCLRDFFQQ WFDDEYASTPEWHERRLPHLQNQNQLVLTRLRDNCHLSLLATPSHTPFYVSPQILVERLLAHERENYPVDVDDLIVACNR ILPGEVTEEVKQQALILTGKYAQAVHYLLGITDDISATNDEYLPLWTQITRTRDANGVFPQYESIAKEQASWPGIAQPFT CTYCILIDKNEYKTWYRLALNNRVLYHWERESIHHYPCHYYYMSLRIDECCHWKDILYYLSLVPHYPDSWLNLFIPATAS GNEVDGFEECLYPLQYLLENQLRVHQAGWIYIAVCLLFEKKISRDLAAEYIQLAIQHNFVDSHYLSECIAYLLMNKYAPI NRFIEYLDNHNSDPAIRKFQKKILENCITQAGDNDLPINYKKLIANLNELTVQGCVK >Mature_857_residues MIPVELIRQKDYPAIVDWGLSLTENERIIALKELQNFDYISLRLGEHVDDAIPLTKIVCTRSYADQKMFPVSWPVKHTLL HMVSRSRYHAIHDALITYFTHCPPDYLDSVFEDCLRVPHTYPDIRLIWRWFQQGWITFNEAAFANVLFHVEMYTRNVQDE IIWLRDNPQVIEKVILPFTQYDVPVLLRSHFHQADNTHHCGVVTEFWDEVFKQLFAENLLPRQLIKELLASLTNNFKKGR LDWHIRLIKMFKPQEDEWIDNQQLLFSGLSASNNSVVNFVIQTIQTIYSHPEFDHSSFMQCLPVISGREKCDKSLLIALD IAGDLAVRYPQYRTTLAQNISGALIQRSEKLQLRTAELMLKYQAAQDVAALAEPWLAGLKHSVLALLQCDSPLGESHVIP MLQHEQVIVPENWDALLFQTGKMLENKEALDIELFYAGIIALQDELPAGYKKQLQPYYKKSHKKYLESSILYCLRDFFQQ WFDDEYASTPEWHERRLPHLQNQNQLVLTRLRDNCHLSLLATPSHTPFYVSPQILVERLLAHERENYPVDVDDLIVACNR ILPGEVTEEVKQQALILTGKYAQAVHYLLGITDDISATNDEYLPLWTQITRTRDANGVFPQYESIAKEQASWPGIAQPFT CTYCILIDKNEYKTWYRLALNNRVLYHWERESIHHYPCHYYYMSLRIDECCHWKDILYYLSLVPHYPDSWLNLFIPATAS GNEVDGFEECLYPLQYLLENQLRVHQAGWIYIAVCLLFEKKISRDLAAEYIQLAIQHNFVDSHYLSECIAYLLMNKYAPI NRFIEYLDNHNSDPAIRKFQKKILENCITQAGDNDLPINYKKLIANLNELTVQGCVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100164; Mature: 100164
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVELIRQKDYPAIVDWGLSLTENERIIALKELQNFDYISLRLGEHVDDAIPLTKIVCT CCCHHHHHCCCCCEEEECCCCCCCCCCEEEHHHHCCCCEEEEECCCCCCHHCCHHHHHHH RSYADQKMFPVSWPVKHTLLHMVSRSRYHAIHDALITYFTHCPPDYLDSVFEDCLRVPHT HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC YPDIRLIWRWFQQGWITFNEAAFANVLFHVEMYTRNVQDEIIWLRDNPQVIEKVILPFTQ CCHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCC YDVPVLLRSHFHQADNTHHCGVVTEFWDEVFKQLFAENLLPRQLIKELLASLTNNFKKGR CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC LDWHIRLIKMFKPQEDEWIDNQQLLFSGLSASNNSVVNFVIQTIQTIYSHPEFDHSSFMQ HHHEEEEEEHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH CLPVISGREKCDKSLLIALDIAGDLAVRYPQYRTTLAQNISGALIQRSEKLQLRTAELML HHHHHCCHHHCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KYQAAQDVAALAEPWLAGLKHSVLALLQCDSPLGESHVIPMLQHEQVIVPENWDALLFQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHH GKMLENKEALDIELFYAGIIALQDELPAGYKKQLQPYYKKSHKKYLESSILYCLRDFFQQ CHHHCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFDDEYASTPEWHERRLPHLQNQNQLVLTRLRDNCHLSLLATPSHTPFYVSPQILVERLL HCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECHHHHHHHHH AHERENYPVDVDDLIVACNRILPGEVTEEVKQQALILTGKYAQAVHYLLGITDDISATND HHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEEEECHHHHHHHHHHCCCCCCCCCCC EYLPLWTQITRTRDANGVFPQYESIAKEQASWPGIAQPFTCTYCILIDKNEYKTWYRLAL CCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEHEEEE NNRVLYHWERESIHHYPCHYYYMSLRIDECCHWKDILYYLSLVPHYPDSWLNLFIPATAS CCEEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC GNEVDGFEECLYPLQYLLENQLRVHQAGWIYIAVCLLFEKKISRDLAAEYIQLAIQHNFV CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSHYLSECIAYLLMNKYAPINRFIEYLDNHNSDPAIRKFQKKILENCITQAGDNDLPINY HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH KKLIANLNELTVQGCVK HHHHHHHHHHHHHHCCC >Mature Secondary Structure MIPVELIRQKDYPAIVDWGLSLTENERIIALKELQNFDYISLRLGEHVDDAIPLTKIVCT CCCHHHHHCCCCCEEEECCCCCCCCCCEEEHHHHCCCCEEEEECCCCCCHHCCHHHHHHH RSYADQKMFPVSWPVKHTLLHMVSRSRYHAIHDALITYFTHCPPDYLDSVFEDCLRVPHT HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC YPDIRLIWRWFQQGWITFNEAAFANVLFHVEMYTRNVQDEIIWLRDNPQVIEKVILPFTQ CCHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCC YDVPVLLRSHFHQADNTHHCGVVTEFWDEVFKQLFAENLLPRQLIKELLASLTNNFKKGR CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC LDWHIRLIKMFKPQEDEWIDNQQLLFSGLSASNNSVVNFVIQTIQTIYSHPEFDHSSFMQ HHHEEEEEEHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH CLPVISGREKCDKSLLIALDIAGDLAVRYPQYRTTLAQNISGALIQRSEKLQLRTAELML HHHHHCCHHHCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KYQAAQDVAALAEPWLAGLKHSVLALLQCDSPLGESHVIPMLQHEQVIVPENWDALLFQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHH GKMLENKEALDIELFYAGIIALQDELPAGYKKQLQPYYKKSHKKYLESSILYCLRDFFQQ CHHHCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFDDEYASTPEWHERRLPHLQNQNQLVLTRLRDNCHLSLLATPSHTPFYVSPQILVERLL HCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECHHHHHHHHH AHERENYPVDVDDLIVACNRILPGEVTEEVKQQALILTGKYAQAVHYLLGITDDISATND HHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEEEECHHHHHHHHHHCCCCCCCCCCC EYLPLWTQITRTRDANGVFPQYESIAKEQASWPGIAQPFTCTYCILIDKNEYKTWYRLAL CCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEHEEEE NNRVLYHWERESIHHYPCHYYYMSLRIDECCHWKDILYYLSLVPHYPDSWLNLFIPATAS CCEEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC GNEVDGFEECLYPLQYLLENQLRVHQAGWIYIAVCLLFEKKISRDLAAEYIQLAIQHNFV CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSHYLSECIAYLLMNKYAPINRFIEYLDNHNSDPAIRKFQKKILENCITQAGDNDLPINY HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH KKLIANLNELTVQGCVK HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA