| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549450
Identifier: 218549450
GI number: 218549450
Start: 2146919
End: 2147743
Strand: Reverse
Name: 218549450
Synonym: EFER_2119
Alternate gene names: NA
Gene position: 2147743-2146919 (Counterclockwise)
Preceding gene: 218549451
Following gene: 218549449
Centisome position: 46.8
GC content: 30.3
Gene sequence:
>825_bases TTGTTAATAAATAAGGGTATCAAGATGTCGAAGGTATGCTGCAGGTTAGCTGGAGGATTAGGTAATCAAATTTTTCAATA TGGCGCCTCATTACTAATTAGCAAAAAAAGTAATGTGAAATATATAGAGCTTGATGATTCGGAGTTAAACAATTATAAAG CATCAAGAAGTAATGAATTGCCACATTATTTCAAAATGACCAATTCAAATGTAGAAAATAAATTTTTGCTTAAATTGCGT TTGCCGCGTATAAATATTTTAGCAAACCTTACAGATAGATTTGTTGGTGACTTAAATTTTAATCGAGTGCTCTATCAAAG TCTTACAAACAAAAGCTATTATTTAGATGGTTATTTCCAAAATTGTTTGGATCAAACTCTTTTTGATGAAATGCTTGAGT TGTTAAAAAAAGATTATCTATATTCGCATCTCAGTATTAAACCAAACGTATGTGCGATTCACATTCGCGGAGGTGATTTT TTAACTAAAAAATATAGTGGTATTGCTTCGACGAATTATTATCTTGAGCAATTGAATAAAATTAAAGAAATGAATTCTGT GGATCAATTCGTAATTGTGACAGATGATAAGAATTATGCGACTGAGATAGCGAAAAAAATATCTATTAAATACTTTTTTT CTGATGGAAATATGCTCGATGATTTTTTATTACTGGCACAATCCCAATTTAAAGTGTTGTCAAATAGTACATTTGCTATA TGGGCTTCTGCGCTAGGATACAAACCAGGATGTATTGTATTAGCGCCTCAAAAGCTAAATATTCATGATACGAGAAATTT TATCTTACCTGGTGAATTAATTTAA
Upstream 100 bases:
>100_bases TTTTTGTTGCTTTATCTTCTTTCATTAAATAATAGTGTTTGGCTTATCATGCTAATAATATTTTTTTATATGATGATACT TGTGTTCATAAAAGAAATTA
Downstream 100 bases:
>100_bases ATTTTAAGGAGTTATTCAAAAATGAAAGTTGCTTTAATTACTGGCATAACCGGACAGGACGGTTCTTACCTGGCAGAGTT TCTGTTGGAAAAAGGTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family; Family; Glycosyltransferase Family; Fucosyltransferase; Alpha-1 2-Fucosyltransferase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLINKGIKMSKVCCRLAGGLGNQIFQYGASLLISKKSNVKYIELDDSELNNYKASRSNELPHYFKMTNSNVENKFLLKLR LPRINILANLTDRFVGDLNFNRVLYQSLTNKSYYLDGYFQNCLDQTLFDEMLELLKKDYLYSHLSIKPNVCAIHIRGGDF LTKKYSGIASTNYYLEQLNKIKEMNSVDQFVIVTDDKNYATEIAKKISIKYFFSDGNMLDDFLLLAQSQFKVLSNSTFAI WASALGYKPGCIVLAPQKLNIHDTRNFILPGELI
Sequences:
>Translated_274_residues MLINKGIKMSKVCCRLAGGLGNQIFQYGASLLISKKSNVKYIELDDSELNNYKASRSNELPHYFKMTNSNVENKFLLKLR LPRINILANLTDRFVGDLNFNRVLYQSLTNKSYYLDGYFQNCLDQTLFDEMLELLKKDYLYSHLSIKPNVCAIHIRGGDF LTKKYSGIASTNYYLEQLNKIKEMNSVDQFVIVTDDKNYATEIAKKISIKYFFSDGNMLDDFLLLAQSQFKVLSNSTFAI WASALGYKPGCIVLAPQKLNIHDTRNFILPGELI >Mature_274_residues MLINKGIKMSKVCCRLAGGLGNQIFQYGASLLISKKSNVKYIELDDSELNNYKASRSNELPHYFKMTNSNVENKFLLKLR LPRINILANLTDRFVGDLNFNRVLYQSLTNKSYYLDGYFQNCLDQTLFDEMLELLKKDYLYSHLSIKPNVCAIHIRGGDF LTKKYSGIASTNYYLEQLNKIKEMNSVDQFVIVTDDKNYATEIAKKISIKYFFSDGNMLDDFLLLAQSQFKVLSNSTFAI WASALGYKPGCIVLAPQKLNIHDTRNFILPGELI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31393; Mature: 31393
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINKGIKMSKVCCRLAGGLGNQIFQYGASLLISKKSNVKYIELDDSELNNYKASRSNEL CCCCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCEEEEEECCCHHHCCCCCCCCCC PHYFKMTNSNVENKFLLKLRLPRINILANLTDRFVGDLNFNRVLYQSLTNKSYYLDGYFQ CCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECHHHH NCLDQTLFDEMLELLKKDYLYSHLSIKPNVCAIHIRGGDFLTKKYSGIASTNYYLEQLNK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEHHHHCCCCHHHHHHHHHHH IKEMNSVDQFVIVTDDKNYATEIAKKISIKYFFSDGNMLDDFLLLAQSQFKVLSNSTFAI HHHCCCCCEEEEEECCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHEE WASALGYKPGCIVLAPQKLNIHDTRNFILPGELI EHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCC >Mature Secondary Structure MLINKGIKMSKVCCRLAGGLGNQIFQYGASLLISKKSNVKYIELDDSELNNYKASRSNEL CCCCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCEEEEEECCCHHHCCCCCCCCCC PHYFKMTNSNVENKFLLKLRLPRINILANLTDRFVGDLNFNRVLYQSLTNKSYYLDGYFQ CCEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECHHHH NCLDQTLFDEMLELLKKDYLYSHLSIKPNVCAIHIRGGDFLTKKYSGIASTNYYLEQLNK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEHHHHCCCCHHHHHHHHHHH IKEMNSVDQFVIVTDDKNYATEIAKKISIKYFFSDGNMLDDFLLLAQSQFKVLSNSTFAI HHHCCCCCEEEEEECCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHEE WASALGYKPGCIVLAPQKLNIHDTRNFILPGELI EHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA