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The map label for this gene is cI

Identifier: 218549402

GI number: 218549402

Start: 2110072

End: 2110779

Strand: Direct

Name: cI

Synonym: EFER_2072

Alternate gene names: NA

Gene position: 2110072-2110779 (Clockwise)

Preceding gene: 218549396

Following gene: 218549403

Centisome position: 45.98

GC content: 45.06

Gene sequence:

>708_bases
ATGGTTCAGAATGAAAAAGTGCGCAAAGAATTCGCCCAGCGGCTAGCGCAAGCCTGTAAAGAAGCTGGTCTTGATGAACA
TGGTAGGGGAATGGCTATAGCCCGTGCCCTTTCTCTTTCGTCCAAAGGCGTTAGCAAATGGTTTAATGCTGAGTCTTTAC
CGCGTCAGGAAAAAATGAATGCGCTTGCGAAATTTCTAAACGTTGATGTTGTTTGGCTTCAGCACGGCACTTCCTTAAAT
GGAGCGAATGATGAAGATACTCTTTCATTTGTTGGCAAATTAAAAAAAGGGTTAGTGCGCGTGGTTGGTGAGGCAATTCT
TGGTGTTGATGGTGCCATCGAGATGACCGAAGAACGCGATGGGTGGCTCAAGATTTATAGCGATGATCCAGATGCCTTTG
GCCTTCGTGTAAAAGGAGATAGCATGTGGCCTAGAATAAAATCAGGAGAATATGTACTCATTGAGCCTAACACCAAAGTA
TTCCCTGGTGATGAGGTGTTTGTCAGAACCATCGAAGGACACAACATGATCAAGATTCTTGGCTATGACAGAGATGGAGA
ATACCAATTTACAAGCATCAACCAGGACCACAGGCCAATAACGTTGCCTTATCATCAAGTAGCAAAAGTGGAGTATGTGG
CTGGTATTCTGAAGCAATCTCGCCATCTGGATGACATCGAGGCAAGGGAATGGCTGAGAGATTCCTGA

Upstream 100 bases:

>100_bases
TCGGCTCATCAAGATTTTGCATAGGAATGTCCTTTTTCGTACTTTCAGTACGCATTATGATTGAACTGAAAGTTTTTGCA
AGTGCTTTAGTATCGTACTC

Downstream 100 bases:

>100_bases
CATCAAAGTCATAGAGTGAGTTTTCTAGTTAGAAATAGTGGTCAATGGGTACGCTTAGGTAAACCGTTTAAACATAATAA
ACAAGCCATATAAGATGAAA

Product: repressor protein of bacteriophage origin

Products: NA

Alternate protein names: Transcriptional Regulator; LexA Repressor; Prophage Repressor; Cro/CI Family Transcriptional Regulator; Partial Represssor R; Transciptional Regulator; Peptidase; Repressor CI Bacteriophage Origin; APSE-2 Prophage

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMNALAKFLNVDVVWLQHGTSLN
GANDEDTLSFVGKLKKGLVRVVGEAILGVDGAIEMTEERDGWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKV
FPGDEVFVRTIEGHNMIKILGYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLRDS

Sequences:

>Translated_235_residues
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMNALAKFLNVDVVWLQHGTSLN
GANDEDTLSFVGKLKKGLVRVVGEAILGVDGAIEMTEERDGWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKV
FPGDEVFVRTIEGHNMIKILGYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLRDS
>Mature_235_residues
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMNALAKFLNVDVVWLQHGTSLN
GANDEDTLSFVGKLKKGLVRVVGEAILGVDGAIEMTEERDGWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKV
FPGDEVFVRTIEGHNMIKILGYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLRDS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26530; Mature: 26530

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMN
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH
ALAKFLNVDVVWLQHGTSLNGANDEDTLSFVGKLKKGLVRVVGEAILGVDGAIEMTEERD
HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
GWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKVFPGDEVFVRTIEGHNMIKIL
CEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEECCCCCEEEEEECCCCEEEEE
GYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLRDS
EECCCCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMN
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH
ALAKFLNVDVVWLQHGTSLNGANDEDTLSFVGKLKKGLVRVVGEAILGVDGAIEMTEERD
HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
GWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKVFPGDEVFVRTIEGHNMIKIL
CEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEECCCCCEEEEEECCCCEEEEE
GYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLRDS
EECCCCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA