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The map label for this gene is ninB [H]

Identifier: 218549393

GI number: 218549393

Start: 2105371

End: 2105787

Strand: Reverse

Name: ninB [H]

Synonym: EFER_2062

Alternate gene names: 218549393

Gene position: 2105787-2105371 (Counterclockwise)

Preceding gene: 218549394

Following gene: 218549392

Centisome position: 45.89

GC content: 48.92

Gene sequence:

>417_bases
GTGACGATGAAGCAAACAATCTTCCTCCGTGGTAAACAACAACAGCAAGCCGCAATCAACGCCATCCTCGCAACACCACT
CGATAAAGACAAGCCAGTTACCATCCGCATTACTGACTACAAGCGCAACCTTGACCAGAACGCAAAATTTCACGCGATGC
TGGCGGATATCGCTCGTCAGGTTCAATGGTGCGGCAAATGGTTAAAACCGGAACAATGGAAGGTTTTGTTGATTAGCGGT
CATGCAGTGGCAACAAAACAGGAAGCTGATGTTTTTCCCGGGCTTGAAGGCGAATACGTCAACATTCGCGAAAGCAGCGC
GCAGATGAGTGTGAAGCGTATGGCAAGTCTTATCGAGTACACAACAGCCTGGGCTATTGGTCATGGTGTCAGATTTACCG
ACAGGAGGTACGAATGA

Upstream 100 bases:

>100_bases
CCTTAGCCAAAGGGTTTACTGTTGATTATTCCAATGGCTTCGGTGATGGAATGGATGCTTATGAGGAAAACATCCGCGCT
GCTGGAGTCAAAGTGAAGGA

Downstream 100 bases:

>100_bases
GACGACAGCGACGAAGTATCACCGACATCATCTGCGAAAACTGCAAATACCTTCCAACGAAACGCTCCAGAAATAAACGC
AAGCCAATCCCAAAAGAATC

Product: ninB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTMKQTIFLRGKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMLADIARQVQWCGKWLKPEQWKVLLISG
HAVATKQEADVFPGLEGEYVNIRESSAQMSVKRMASLIEYTTAWAIGHGVRFTDRRYE

Sequences:

>Translated_138_residues
MTMKQTIFLRGKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMLADIARQVQWCGKWLKPEQWKVLLISG
HAVATKQEADVFPGLEGEYVNIRESSAQMSVKRMASLIEYTTAWAIGHGVRFTDRRYE
>Mature_137_residues
TMKQTIFLRGKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMLADIARQVQWCGKWLKPEQWKVLLISGH
AVATKQEADVFPGLEGEYVNIRESSAQMSVKRMASLIEYTTAWAIGHGVRFTDRRYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 15821; Mature: 15690

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKQTIFLRGKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMLADIARQ
CCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
VQWCGKWLKPEQWKVLLISGHAVATKQEADVFPGLEGEYVNIRESSAQMSVKRMASLIEY
HHHHHCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
TTAWAIGHGVRFTDRRYE
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TMKQTIFLRGKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMLADIARQ
CCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
VQWCGKWLKPEQWKVLLISGHAVATKQEADVFPGLEGEYVNIRESSAQMSVKRMASLIEY
HHHHHCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
TTAWAIGHGVRFTDRRYE
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]