| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549371
Identifier: 218549371
GI number: 218549371
Start: 2090148
End: 2091566
Strand: Reverse
Name: 218549371
Synonym: EFER_2039
Alternate gene names: NA
Gene position: 2091566-2090148 (Counterclockwise)
Preceding gene: 218549372
Following gene: 218549370
Centisome position: 45.58
GC content: 50.74
Gene sequence:
>1419_bases ATGCCGATTCAGCAACTTCCGCTTATGAAAGGTGTCGGCAAAGACTTCCGAAACGCCGACTATATCGACTATCTGCCAGT GAATATGCTGGCAACCCCCAAAGAAATCCTCAACAGCAGCGGATATCTTCGCTCATTCCCGGGCATTGCCAAACGTTCTG ATGTGAACGGTGTATCTCGCGGCGTCGAGTACAACATGGCGCAGAGTGCTGTTTATCGTGTGTGTGGCGGCAAGCTCTAC AAAGGCGAAAGCGAAGTCGGTGACGTCGCCGGAAGTGGCCGCGTATCAATGGCGCATGGTCGAACATCTCAGGCTGTAGG CGTTAATGGTCAACTGGTCGAGTATCGCTATGATGGTACGGTTAAAACCGTCTCAAACTGGCCTACAGACAGCGGATTCA CACAGTACGAGTTAGGTTCAGTTCGTGACATTACGCGCTTACGTGGGCGTTATGCGTGGTCAAAAGACGGTACTGATTCA TGGTTTATCACTGACCTTGAAGACGAATCACACCCTGACCGATACAGCGCACAATATCGCGCAGAATCTCAGCCTGATGG CATCATCGGCATAGGTACATGGCGAGACTTCATCGTCTGCTTTGGTTCATCGACGATTGAATATTTCTCCCTGACTGGTG CAACCACCGTTGGTGCCGCTTTGTATGTCGCACAGCCATCACTGATGGTGCAGAAAGGCATTGCCGGAACTTACTGCAAA ACGCCGTTTGCTGATTCCTATGCGTTTATCAGCAATCCGGCAACAGGTGCGCCGTCTGTGTATATCATCGGCTCCGGTCA GGTATCACCAATCGCCAGCGCGAGCATTGAGAAAATACTACGCTCCTACACTGCTGATGAACTGGCTGATGGCGTGATGG AATCGTTGCGGTTTGATGCTCATGAACTGCTGATTATCCATCTTCCGCGCCATGTTCTGGTGTACGACGCATCTTCAAGC GCCAATGGTCCGCAATGGTGTGTGCTGAAAACAGGCCTGTATGACGATGTGTACCGCGCTATCGACTTCATTTACGAAGG CAATCAGATAACGTGCGGCGATAAGCTGGAGTCCGTGACCGGGAAATTGCAATTCGACATCAGCAGCCAGTATGGGCTAC AGCAAGAACACCTGCTGTTTACTCCACTCTTCAAAGCAGATAACGCCAGATGCTTTGATCTGGAGGTGGAATCATCGACG GGTGTTGCGCAGTACGCTGACCGCCTGTTTCTGTCTGCAACCACTGACGGCATCAATTACGGGCGTGAGCAGATGATTGA GCAGAATGAACCGTTCGTTTACGACAAACGCGTTTTGTGGAAGAAAGTAGGGCGCATCAGGAAAAACATTGGCTTCAAAT TGCGCGTTATCACGAAGTCACCTGTCACTCTGTCTGGTGCTCAGATAAGGATTGAGTAA
Upstream 100 bases:
>100_bases TCCAAACCGTATGCCTGTTGGTAGTGGTAACCAGTTGGCGAAGTGGAACGGTTGGAATTACTTCCACCGGAAGGAACATT GCGATGACGGGAGCGAATAA
Downstream 100 bases:
>100_bases TGGCGGATTCGAATCTCAATACACCTGTTATTGTTCAGGCGACGCGGCTCGATACATCAATCCTTCCACGCAATATCTTC TCGCAGTCGTATCTGCTTTA
Product: Packaged DNA stabilization protein from phage
Products: NA
Alternate protein names: APSE-2 Prophage
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSRGVEYNMAQSAVYRVCGGKLY KGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDS WFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCK TPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSS ANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESST GVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKKVGRIRKNIGFKLRVITKSPVTLSGAQIRIE
Sequences:
>Translated_472_residues MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSRGVEYNMAQSAVYRVCGGKLY KGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDS WFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCK TPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSS ANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESST GVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKKVGRIRKNIGFKLRVITKSPVTLSGAQIRIE >Mature_471_residues PIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSRGVEYNMAQSAVYRVCGGKLYK GESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDSW FITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKT PFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSSA NGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESSTG VAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKKVGRIRKNIGFKLRVITKSPVTLSGAQIRIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52138; Mature: 52007
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSR CCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCEECCCCCCCCCCCCHHHC GVEYNMAQSAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGT CCCCHHHHHHHHHHHCCEEECCCCHHCCCCCCCCEEEECCCCCCEECCCCEEEEEEECCE VKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYR EEEECCCCCCCCCCEEECCCHHHHHHHHCCEEECCCCCCCEEEEECCCCCCCCHHCHHCC AESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCK CCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCHHHHEEEEEECCHHHHHCCCCCCCCC TPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDA CCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC HELLIIHLPRHVLVYDASSSANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVT EEEEEEEECCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHEECCCEEECCCHHHHCC GKLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINY CEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHEEEEEECCCHHH GREQMIEQNEPFVYDKRVLWKKVGRIRKNIGFKLRVITKSPVTLSGAQIRIE CHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCEEEEC >Mature Secondary Structure PIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSR CCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCEECCCCCCCCCCCCHHHC GVEYNMAQSAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGT CCCCHHHHHHHHHHHCCEEECCCCHHCCCCCCCCEEEECCCCCCEECCCCEEEEEEECCE VKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYR EEEECCCCCCCCCCEEECCCHHHHHHHHCCEEECCCCCCCEEEEECCCCCCCCHHCHHCC AESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCK CCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCHHHHEEEEEECCHHHHHCCCCCCCCC TPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDA CCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC HELLIIHLPRHVLVYDASSSANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVT EEEEEEEECCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHEECCCEEECCCHHHHCC GKLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINY CEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHEEEEEECCCHHH GREQMIEQNEPFVYDKRVLWKKVGRIRKNIGFKLRVITKSPVTLSGAQIRIE CHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA