| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yrhL [H]
Identifier: 218549364
GI number: 218549364
Start: 2080287
End: 2082317
Strand: Direct
Name: yrhL [H]
Synonym: EFER_2032
Alternate gene names: 218549364
Gene position: 2080287-2082317 (Clockwise)
Preceding gene: 218549363
Following gene: 218549396
Centisome position: 45.33
GC content: 33.87
Gene sequence:
>2031_bases TTGTCATCTCTTCAAACATTTAGTCAAAACATCCTGCATAAAGCCAGAAGTGTTTTAGGGCAGGTAAACCAAGAGAATAG TATGAAATCTGTGAAATATAGACCTGATATTGACGGTTTGCGCACATTGGCCGTGCTGATGGTTATCTTGTACCATATTG GTGTACAAAAAATAAGCGGCGGTTTTATAGGTGTTGATGTTTTTTTTGTTATTTCTGGATATCTCATCACTGGAATCATA TATCCTAAATTACAAGACGGGACCTTTAGCTATGAAGACTTTTATCTGCGAAGGATAAAAAGAATTTACCCAACTCTACT ATTAGTAGTTGCAGTGACATTCATTGCATCATATTTCTTCATGATGCAAACAGATTTTAAAGAATTCATAAATAGTGCTC TTGCATCGTTGCTTTCATTAAGCAATTTCTTTTTCATGTTGAACACTGGTGGTTACTTTGACCAGTCTACAGACAATCTC CCGCTTTTACACACATGGTCATTATCTGTTGAAGAACAGTTTTACATTCTTTGGCCGATAATATTAACCATAGCATTTAA ATTTAAGAAGGGAACAGTTATATTCATAGTTTCCCTTTTGTTATCCATTGGGTATTCTCAATATCTAACATTCACTAACC CTTCATTTTCTTACTACATGATACCATCTAGAGCTTTCGAGTTGTTAATTGGTGGTATGTGCTCAATTTATCTAAAAAAT ACATCCCCTACAATCAAGATCAGATCTTTACTTGCATCGTTAGGTGCAACAATTATTATTGCCTCATCATTAATACTGTC AAAGAATTCAAACTTCCCTGGATTGAATGCGCTACCAGTATGTCTTGGAACTGCAATGATAATAATTGCTGGTAATGGCA ATATTTATCCATCAGTTAACAAAATCCTAAGTCTTAAGCCGATTGTTTACATAGGAAAAATATCCTATGCTGCTTACTTA TGGCATTGGCCATTAATTGCTTTTTATAATTATAGAGGCATTCCTTTAACACCGTTAAATCAATTAATCATTATCATTAT CACACTATTTTTATCAAGCGTAACATTTCATTTCATCGAAAATAAGACCAGATATCTGAATTTTTCATTTCAAAAAACAG TCCTGCTATTTTTCGTTTTACCTGTCATTGCGTTTATAGGAATCACCATTACTTCATATAAAACAGATGGGTTCGCTTAC CGATTCAAAGGTTACATCGATGAACTGAGTGATGAAAATGATCCTAGTAAAATAAGAAGCAATTGCCATACAAACTATTA TAAAAACAATTGGGATATCAAAAGAATAATCCCAGAGTGTAATATTGGTGACACATCAAGACCTGTTGATGGATATCTAT GGGGAGATTCATTTGGAAATGCAAGCGCAGGGTTCTTTGACTCTTATGGGAAGGCTAACGGGCTTAACTTTCAAGAAAGA ACAATAAGCTGGACCCCACCTATACCCGCAACCTCCTTTGGTCTCCCTAACTTTAAAAATGAATATAAAACCAGCACAGC AAACTTTACTTCTTGGATATTCAATGAATCTCTAAGATATAAGTACGTTGTATTATCTGCAGACTGGAGGCAATATGACA AATGTTCTCGTGATGAAATCACTGGTATACCTCATGAATGTGCTCTGTTTGATTCTAATGGTAACAACATCACCAGAGAC TATAGAAATAGAGTTGAATCCATGATTAAAGAATACATCAATCACGGCGTGAATGTAATAATCTTTAACTCTGTTAATGG CATTGATTTTAATAAAATAAAATCAGGGAAAATAAGTGGAAAAGACATTTCCACAAAAGAATACATGAAAAAAGAGGTTG TAGGGAGTGATGAATTTATTCATTATCTTGTTAAAAAATACCCACAAATTACTTATATTGATCCTAATAATATTCTCTGC AAAAATGGTTTATGCACAGGTCAGATTAATGGCAAAATAATTTATAGAGACGGTGGCCATTTAAACTGGTCTGGTTCAAA GGAACTTGGAAAACTTTACGTTAAAGAGTAA
Upstream 100 bases:
>100_bases TTAGTATCATTGGTAACACGATCACGCTATGGTACAGCTATCCAATCTATGTTTTCTTATTTTTTTGCTTGTCGATAAAA GAGCTTTTAGATGATAAAAT
Downstream 100 bases:
>100_bases TCATAGAAAAGGCGCCGTTAAACGGCGCCTTATTTATATCAAACATTAAGAGTTTGAATTATATCAGTATTACCTTTATT GTCGACTGGATAGTTACATG
Product: acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 676; Mature: 675
Protein sequence:
>676_residues MSSLQTFSQNILHKARSVLGQVNQENSMKSVKYRPDIDGLRTLAVLMVILYHIGVQKISGGFIGVDVFFVISGYLITGII YPKLQDGTFSYEDFYLRRIKRIYPTLLLVVAVTFIASYFFMMQTDFKEFINSALASLLSLSNFFFMLNTGGYFDQSTDNL PLLHTWSLSVEEQFYILWPIILTIAFKFKKGTVIFIVSLLLSIGYSQYLTFTNPSFSYYMIPSRAFELLIGGMCSIYLKN TSPTIKIRSLLASLGATIIIASSLILSKNSNFPGLNALPVCLGTAMIIIAGNGNIYPSVNKILSLKPIVYIGKISYAAYL WHWPLIAFYNYRGIPLTPLNQLIIIIITLFLSSVTFHFIENKTRYLNFSFQKTVLLFFVLPVIAFIGITITSYKTDGFAY RFKGYIDELSDENDPSKIRSNCHTNYYKNNWDIKRIIPECNIGDTSRPVDGYLWGDSFGNASAGFFDSYGKANGLNFQER TISWTPPIPATSFGLPNFKNEYKTSTANFTSWIFNESLRYKYVVLSADWRQYDKCSRDEITGIPHECALFDSNGNNITRD YRNRVESMIKEYINHGVNVIIFNSVNGIDFNKIKSGKISGKDISTKEYMKKEVVGSDEFIHYLVKKYPQITYIDPNNILC KNGLCTGQINGKIIYRDGGHLNWSGSKELGKLYVKE
Sequences:
>Translated_676_residues MSSLQTFSQNILHKARSVLGQVNQENSMKSVKYRPDIDGLRTLAVLMVILYHIGVQKISGGFIGVDVFFVISGYLITGII YPKLQDGTFSYEDFYLRRIKRIYPTLLLVVAVTFIASYFFMMQTDFKEFINSALASLLSLSNFFFMLNTGGYFDQSTDNL PLLHTWSLSVEEQFYILWPIILTIAFKFKKGTVIFIVSLLLSIGYSQYLTFTNPSFSYYMIPSRAFELLIGGMCSIYLKN TSPTIKIRSLLASLGATIIIASSLILSKNSNFPGLNALPVCLGTAMIIIAGNGNIYPSVNKILSLKPIVYIGKISYAAYL WHWPLIAFYNYRGIPLTPLNQLIIIIITLFLSSVTFHFIENKTRYLNFSFQKTVLLFFVLPVIAFIGITITSYKTDGFAY RFKGYIDELSDENDPSKIRSNCHTNYYKNNWDIKRIIPECNIGDTSRPVDGYLWGDSFGNASAGFFDSYGKANGLNFQER TISWTPPIPATSFGLPNFKNEYKTSTANFTSWIFNESLRYKYVVLSADWRQYDKCSRDEITGIPHECALFDSNGNNITRD YRNRVESMIKEYINHGVNVIIFNSVNGIDFNKIKSGKISGKDISTKEYMKKEVVGSDEFIHYLVKKYPQITYIDPNNILC KNGLCTGQINGKIIYRDGGHLNWSGSKELGKLYVKE >Mature_675_residues SSLQTFSQNILHKARSVLGQVNQENSMKSVKYRPDIDGLRTLAVLMVILYHIGVQKISGGFIGVDVFFVISGYLITGIIY PKLQDGTFSYEDFYLRRIKRIYPTLLLVVAVTFIASYFFMMQTDFKEFINSALASLLSLSNFFFMLNTGGYFDQSTDNLP LLHTWSLSVEEQFYILWPIILTIAFKFKKGTVIFIVSLLLSIGYSQYLTFTNPSFSYYMIPSRAFELLIGGMCSIYLKNT SPTIKIRSLLASLGATIIIASSLILSKNSNFPGLNALPVCLGTAMIIIAGNGNIYPSVNKILSLKPIVYIGKISYAAYLW HWPLIAFYNYRGIPLTPLNQLIIIIITLFLSSVTFHFIENKTRYLNFSFQKTVLLFFVLPVIAFIGITITSYKTDGFAYR FKGYIDELSDENDPSKIRSNCHTNYYKNNWDIKRIIPECNIGDTSRPVDGYLWGDSFGNASAGFFDSYGKANGLNFQERT ISWTPPIPATSFGLPNFKNEYKTSTANFTSWIFNESLRYKYVVLSADWRQYDKCSRDEITGIPHECALFDSNGNNITRDY RNRVESMIKEYINHGVNVIIFNSVNGIDFNKIKSGKISGKDISTKEYMKKEVVGSDEFIHYLVKKYPQITYIDPNNILCK NGLCTGQINGKIIYRDGGHLNWSGSKELGKLYVKE
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17562866, Length=508, Percent_Identity=27.9527559055118, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71990417, Length=372, Percent_Identity=28.494623655914, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17560876, Length=380, Percent_Identity=27.1052631578947, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17562864, Length=401, Percent_Identity=27.431421446384, Blast_Score=118, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17507283, Length=387, Percent_Identity=29.9741602067183, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17559544, Length=353, Percent_Identity=27.4787535410765, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17507733, Length=326, Percent_Identity=28.8343558282209, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI86562056, Length=356, Percent_Identity=28.0898876404494, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI212646204, Length=354, Percent_Identity=27.683615819209, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17507735, Length=327, Percent_Identity=30.5810397553517, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17562856, Length=367, Percent_Identity=29.4277929155313, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17507167, Length=448, Percent_Identity=27.0089285714286, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI212640769, Length=382, Percent_Identity=30.1047120418848, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17543924, Length=492, Percent_Identity=26.4227642276423, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17559158, Length=301, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=5e-23, Organism=Caenorhabditis elegans, GI133903927, Length=305, Percent_Identity=30.4918032786885, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17507299, Length=358, Percent_Identity=29.3296089385475, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17507289, Length=358, Percent_Identity=29.3296089385475, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17507287, Length=319, Percent_Identity=30.0940438871473, Blast_Score=102, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17541014, Length=445, Percent_Identity=26.5168539325843, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17541016, Length=445, Percent_Identity=26.5168539325843, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI193208811, Length=356, Percent_Identity=28.0898876404494, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI212642133, Length=359, Percent_Identity=30.08356545961, Blast_Score=99, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71984481, Length=339, Percent_Identity=28.9085545722714, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17532481, Length=319, Percent_Identity=29.153605015674, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17509001, Length=358, Percent_Identity=29.8882681564246, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17506687, Length=388, Percent_Identity=29.639175257732, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17542538, Length=326, Percent_Identity=28.5276073619632, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193203179, Length=322, Percent_Identity=29.1925465838509, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17541414, Length=504, Percent_Identity=27.9761904761905, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17540232, Length=556, Percent_Identity=26.6187050359712, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI32567150, Length=414, Percent_Identity=25.3623188405797, Blast_Score=92, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71982248, Length=378, Percent_Identity=27.7777777777778, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193203181, Length=313, Percent_Identity=28.4345047923323, Blast_Score=89, Evalue=8e-18, Organism=Caenorhabditis elegans, GI71983744, Length=323, Percent_Identity=28.7925696594427, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71988046, Length=339, Percent_Identity=28.6135693215339, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115534354, Length=448, Percent_Identity=29.0178571428571, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17542762, Length=336, Percent_Identity=28.2738095238095, Blast_Score=87, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17541412, Length=215, Percent_Identity=34.4186046511628, Blast_Score=86, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17539118, Length=217, Percent_Identity=33.1797235023041, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17531875, Length=342, Percent_Identity=29.5321637426901, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193208625, Length=362, Percent_Identity=27.0718232044199, Blast_Score=79, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 - InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 76825; Mature: 76694
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLQTFSQNILHKARSVLGQVNQENSMKSVKYRPDIDGLRTLAVLMVILYHIGVQKISG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCHHHHCC GFIGVDVFFVISGYLITGIIYPKLQDGTFSYEDFYLRRIKRIYPTLLLVVAVTFIASYFF CEEHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMQTDFKEFINSALASLLSLSNFFFMLNTGGYFDQSTDNLPLLHTWSLSVEEQFYILWPI HHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEHHHH ILTIAFKFKKGTVIFIVSLLLSIGYSQYLTFTNPSFSYYMIPSRAFELLIGGMCSIYLKN HHHHHHHCCCCHHHHHHHHHHHCCCHHEEEEECCCEEEEECHHHHHHHHHCCEEEEEEEC TSPTIKIRSLLASLGATIIIASSLILSKNSNFPGLNALPVCLGTAMIIIAGNGNIYPSVN CCCCHHHHHHHHHHCHHHHHHHHHHEECCCCCCCCCHHHHHHCCEEEEEECCCCCCCCHH KILSLKPIVYIGKISYAAYLWHWPLIAFYNYRGIPLTPLNQLIIIIITLFLSSVTFHFIE HHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NKTRYLNFSFQKTVLLFFVLPVIAFIGITITSYKTDGFAYRFKGYIDELSDENDPSKIRS CCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEHHHHHHHCCCCCHHHHHH NCHTNYYKNNWDIKRIIPECNIGDTSRPVDGYLWGDSFGNASAGFFDSYGKANGLNFQER CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCCCHHC TISWTPPIPATSFGLPNFKNEYKTSTANFTSWIFNESLRYKYVVLSADWRQYDKCSRDEI EEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCEEEEEEEECCHHHHHCCCCCCC TGIPHECALFDSNGNNITRDYRNRVESMIKEYINHGVNVIIFNSVNGIDFNKIKSGKISG CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC KDISTKEYMKKEVVGSDEFIHYLVKKYPQITYIDPNNILCKNGLCTGQINGKIIYRDGGH CCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCEEECCCEEEEEECCEEEEECCCE LNWSGSKELGKLYVKE ECCCCCCCCCCCCCCC >Mature Secondary Structure SSLQTFSQNILHKARSVLGQVNQENSMKSVKYRPDIDGLRTLAVLMVILYHIGVQKISG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCHHHHCC GFIGVDVFFVISGYLITGIIYPKLQDGTFSYEDFYLRRIKRIYPTLLLVVAVTFIASYFF CEEHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMQTDFKEFINSALASLLSLSNFFFMLNTGGYFDQSTDNLPLLHTWSLSVEEQFYILWPI HHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEHHHH ILTIAFKFKKGTVIFIVSLLLSIGYSQYLTFTNPSFSYYMIPSRAFELLIGGMCSIYLKN HHHHHHHCCCCHHHHHHHHHHHCCCHHEEEEECCCEEEEECHHHHHHHHHCCEEEEEEEC TSPTIKIRSLLASLGATIIIASSLILSKNSNFPGLNALPVCLGTAMIIIAGNGNIYPSVN CCCCHHHHHHHHHHCHHHHHHHHHHEECCCCCCCCCHHHHHHCCEEEEEECCCCCCCCHH KILSLKPIVYIGKISYAAYLWHWPLIAFYNYRGIPLTPLNQLIIIIITLFLSSVTFHFIE HHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NKTRYLNFSFQKTVLLFFVLPVIAFIGITITSYKTDGFAYRFKGYIDELSDENDPSKIRS CCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEHHHHHHHCCCCCHHHHHH NCHTNYYKNNWDIKRIIPECNIGDTSRPVDGYLWGDSFGNASAGFFDSYGKANGLNFQER CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCCCHHC TISWTPPIPATSFGLPNFKNEYKTSTANFTSWIFNESLRYKYVVLSADWRQYDKCSRDEI EEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCEEEEEEEECCHHHHHCCCCCCC TGIPHECALFDSNGNNITRDYRNRVESMIKEYINHGVNVIIFNSVNGIDFNKIKSGKISG CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC KDISTKEYMKKEVVGSDEFIHYLVKKYPQITYIDPNNILCKNGLCTGQINGKIIYRDGGH CCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCEEECCCEEEEEECCEEEEECCCE LNWSGSKELGKLYVKE ECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]