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The map label for this gene is ydcX [H]

Identifier: 218548874

GI number: 218548874

Start: 1555834

End: 1556016

Strand: Direct

Name: ydcX [H]

Synonym: EFER_1519

Alternate gene names: 218548874

Gene position: 1555834-1556016 (Clockwise)

Preceding gene: 218548873

Following gene: 218548876

Centisome position: 33.91

GC content: 42.62

Gene sequence:

>183_bases
ATGCCCGGAATGACGATATTTCAAAAAATGCTAATTTTCTACGCTGTGATGGCGGTCATCTCTTCTATCATTACCTGGTT
TCTCTCCCATGATAAAACGAGCATACGCCTGCTTAGTGCTTTTCTGGTAGGTATCACCTGGCCAATGAGCTTGCCTGTTG
CACTTCTGTTTTCACTTTTTTAG

Upstream 100 bases:

>100_bases
AACGGGTATATGTGCTCAGGTTCATATCTGAGTTCGCTAATAATCACTTGATTCACATTAAATATGGGAGCATATTTCGC
GCGTTACAACTTATGGCAGG

Downstream 100 bases:

>100_bases
CCATACGCTCCCACCCATGCTGAATATTCAGTGGGTGGGTTAAAGGCTTATTGTGGCTCGCTGGTTGGGGCGTCCTGGTA
TGGTGTGGCATTTGCAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MPGMTIFQKMLIFYAVMAVISSIITWFLSHDKTSIRLLSAFLVGITWPMSLPVALLFSLF

Sequences:

>Translated_60_residues
MPGMTIFQKMLIFYAVMAVISSIITWFLSHDKTSIRLLSAFLVGITWPMSLPVALLFSLF
>Mature_59_residues
PGMTIFQKMLIFYAVMAVISSIITWFLSHDKTSIRLLSAFLVGITWPMSLPVALLFSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjdO [H]

Homologues:

Organism=Escherichia coli, GI87081912, Length=57, Percent_Identity=75.4385964912281, Blast_Score=90, Evalue=2e-20,
Organism=Escherichia coli, GI87082373, Length=57, Percent_Identity=73.6842105263158, Blast_Score=84, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019689 [H]

Pfam domain/function: PF10753 DUF2566 [H]

EC number: NA

Molecular weight: Translated: 6796; Mature: 6665

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGMTIFQKMLIFYAVMAVISSIITWFLSHDKTSIRLLSAFLVGITWPMSLPVALLFSLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC
>Mature Secondary Structure 
PGMTIFQKMLIFYAVMAVISSIITWFLSHDKTSIRLLSAFLVGITWPMSLPVALLFSLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]