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The map label for this gene is ygeH [H]

Identifier: 218548866

GI number: 218548866

Start: 1547421

End: 1547942

Strand: Direct

Name: ygeH [H]

Synonym: EFER_1511

Alternate gene names: 218548866

Gene position: 1547421-1547942 (Clockwise)

Preceding gene: 218548865

Following gene: 218548868

Centisome position: 33.72

GC content: 33.91

Gene sequence:

>522_bases
ATGAATTGGTCAAATACTATTAACGAACATTCTCTTTATATGTTTGAGAATTTTTTATTCTCTTCAGAGGGAGTGTTACG
CTGTAAAGATAAAGAAGTGTATTTGCCACCTAAAGAAGCAGGAGTGCTTACCGTTCTACTAAAAAACTATCGGCATATTG
TTTCGAAAGAAAAAATCATCAATGATGTATGGAATAATGCTGTTAGTGACGAATCACTGACCCGGTGTGTCTATATTCTG
CGAAATGCTCTGGGTAAAGATAACAAGCATCTTATTGAGACGGTATATAATAGGGGCTATAAAATTAATGCCACTGTTAC
AGTGGTTGATGGTTCGTCGCAAACAAAGTACGAAGAGTTATATCATAATTTTCCTCATCAGCAGAATGATTGCATAAAAA
TTAGTAATACACTGATAAAACTTCTGGCGCTGATTGATGCAAAGAAAATAGATGGTCAATTTGACGGGTGTGAATTTGAT
AGTCTGAAAAAATCATTATTACAATATTGCAATCAAATGTAA

Upstream 100 bases:

>100_bases
GCCATCATCAGGTGATGACCTGACTACAACTCAGATGTAATAAATGATAATGCTGTTACCAGGCATGAATGGAGTCGGGT
AATTAGATAATGGAGAATTT

Downstream 100 bases:

>100_bases
GGTGATAACACTCGCAACATGAGCAATTTTTTGTCAATTCTGCACTAAAGAATTGTATAGACATGTACCGTGCCAACTTT
TGATATTAAATATTCATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MNWSNTINEHSLYMFENFLFSSEGVLRCKDKEVYLPPKEAGVLTVLLKNYRHIVSKEKIINDVWNNAVSDESLTRCVYIL
RNALGKDNKHLIETVYNRGYKINATVTVVDGSSQTKYEELYHNFPHQQNDCIKISNTLIKLLALIDAKKIDGQFDGCEFD
SLKKSLLQYCNQM

Sequences:

>Translated_173_residues
MNWSNTINEHSLYMFENFLFSSEGVLRCKDKEVYLPPKEAGVLTVLLKNYRHIVSKEKIINDVWNNAVSDESLTRCVYIL
RNALGKDNKHLIETVYNRGYKINATVTVVDGSSQTKYEELYHNFPHQQNDCIKISNTLIKLLALIDAKKIDGQFDGCEFD
SLKKSLLQYCNQM
>Mature_173_residues
MNWSNTINEHSLYMFENFLFSSEGVLRCKDKEVYLPPKEAGVLTVLLKNYRHIVSKEKIINDVWNNAVSDESLTRCVYIL
RNALGKDNKHLIETVYNRGYKINATVTVVDGSSQTKYEELYHNFPHQQNDCIKISNTLIKLLALIDAKKIDGQFDGCEFD
SLKKSLLQYCNQM

Specific function: Unknown

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1789216, Length=155, Percent_Identity=36.7741935483871, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 20003; Mature: 20003

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWSNTINEHSLYMFENFLFSSEGVLRCKDKEVYLPPKEAGVLTVLLKNYRHIVSKEKII
CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH
NDVWNNAVSDESLTRCVYILRNALGKDNKHLIETVYNRGYKINATVTVVDGSSQTKYEEL
HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHH
YHNFPHQQNDCIKISNTLIKLLALIDAKKIDGQFDGCEFDSLKKSLLQYCNQM
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNWSNTINEHSLYMFENFLFSSEGVLRCKDKEVYLPPKEAGVLTVLLKNYRHIVSKEKII
CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH
NDVWNNAVSDESLTRCVYILRNALGKDNKHLIETVYNRGYKINATVTVVDGSSQTKYEEL
HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHH
YHNFPHQQNDCIKISNTLIKLLALIDAKKIDGQFDGCEFDSLKKSLLQYCNQM
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]