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The map label for this gene is rsxE

Identifier: 218548772

GI number: 218548772

Start: 1450420

End: 1451112

Strand: Reverse

Name: rsxE

Synonym: EFER_1411

Alternate gene names: 218548772

Gene position: 1451112-1450420 (Counterclockwise)

Preceding gene: 218548773

Following gene: 218548771

Centisome position: 31.62

GC content: 48.63

Gene sequence:

>693_bases
ATGAGCGAAATTAAAGATGTCATTGTCCAGGGATTGTGGAAAAACAACTCTGCTCTGGTGCAGCTGCTCGGCATGTGTCC
TTTATTGGCGGTCACTTCTACAGCGACAAACGCGCTTGGATTAGGGCTGGCAACGACGCTGGTGCTGACTCTAACCAATC
TGACGATTTCGACGCTACGTCGTTGGACACCAACAGAGATCCGTATCCCGATTTATGTCATGATCATCGCTTCGGTGGTA
AGCGCAGTGCAAATGTTGATCAACGCCTATGCATTTGGTCTTTATCAGTCGCTGGGGATCTTTATTCCGCTTATTGTTAC
GAACTGTATCGTCGTTGGTCGTGCAGAAGCCTTTGCGGCGAAAAAAGGCCCTGCACTTTCGGCACTGGATGGTTTTGCAA
TTGGAATGGGGGCAACTGGCGCAATGTTTGTTCTCGGCGCCATGCGTGAAATTATTGGTAATGGCACGTTGTTTGATGGC
GCCGATGCGCTACTGGGCAATTGGGCCAAAGTCTTACGTGTCGAAATTTTCCATACCGATTCCCCTTTCCTGCTGGCAAT
GTTGCCGCCAGGTGCGTTTATCGGCCTTGGACTAATGCTGGCAGGTAAATATCTTATCGATGAAAAAATGAAAAAGCGCC
GTGCAAAAACTGTTGTGAATGAAATACCAGCAGGCGAAACAGGGAAAGTCTGA

Upstream 100 bases:

>100_bases
TCACACCGCGTGCTGTCGTAAACGCGGTCAAACGAGCCGGACTGTACGCCCAACAGTTGCCAGAACAACTTCCTCAACTT
ACCGCCTGTGGAGAATAACA

Downstream 100 bases:

>100_bases
TGAATCAAACTAAAAGAGTGGAGATCCTCACGCGCCTGCGTGATAACAATCCACATCCAACAACTGAACTCAATTTTTCT
TCACCGTTTGAACTGTTAAT

Product: electron transport complex RsxE subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSEIKDVIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRRWTPTEIRIPIYVMIIASVV
SAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFAIGMGATGAMFVLGAMREIIGNGTLFDG
ADALLGNWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDEKMKKRRAKTVVNEIPAGETGKV

Sequences:

>Translated_230_residues
MSEIKDVIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRRWTPTEIRIPIYVMIIASVV
SAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFAIGMGATGAMFVLGAMREIIGNGTLFDG
ADALLGNWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDEKMKKRRAKTVVNEIPAGETGKV
>Mature_229_residues
SEIKDVIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRRWTPTEIRIPIYVMIIASVVS
AVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFAIGMGATGAMFVLGAMREIIGNGTLFDGA
DALLGNWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDEKMKKRRAKTVVNEIPAGETGKV

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4660

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family

Homologues:

Organism=Escherichia coli, GI1787919, Length=231, Percent_Identity=90.9090909090909, Blast_Score=381, Evalue=1e-107,
Organism=Escherichia coli, GI1787914, Length=156, Percent_Identity=34.6153846153846, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFE_ESCF3 (B7LQN8)

Other databases:

- EMBL:   CU928158
- RefSeq:   YP_002382563.1
- EnsemblBacteria:   EBESCT00000121880
- GeneID:   7119666
- GenomeReviews:   CU928158_GR
- KEGG:   efe:EFER_1411
- GeneTree:   EBGT00050000011040
- HOGENOM:   HBG624915
- ProtClustDB:   PRK12405
- BioCyc:   EFER585054:EFER_1411-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00478
- InterPro:   IPR003667
- InterPro:   IPR010968
- PIRSF:   PIRSF006102
- TIGRFAMs:   TIGR01948

Pfam domain/function: PF02508 Rnf-Nqr

EC number: NA

Molecular weight: Translated: 24409; Mature: 24277

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x267ac844)-; HASH(0x27877618)-; HASH(0x260e82dc)-; HASH(0x27982314)-; HASH(0x289c1f80)-; HASH(0x28da4f8c)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIKDVIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWTPTEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KKGPALSALDGFAIGMGATGAMFVLGAMREIIGNGTLFDGADALLGNWAKVLRVEIFHTD
CCCCCHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECC
SPFLLAMLPPGAFIGLGLMLAGKYLIDEKMKKRRAKTVVNEIPAGETGKV
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure 
SEIKDVIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWTPTEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KKGPALSALDGFAIGMGATGAMFVLGAMREIIGNGTLFDGADALLGNWAKVLRVEIFHTD
CCCCCHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECC
SPFLLAMLPPGAFIGLGLMLAGKYLIDEKMKKRRAKTVVNEIPAGETGKV
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA