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The map label for this gene is ydhS [H]

Identifier: 218548740

GI number: 218548740

Start: 1414567

End: 1416177

Strand: Reverse

Name: ydhS [H]

Synonym: EFER_1378

Alternate gene names: 218548740

Gene position: 1416177-1414567 (Counterclockwise)

Preceding gene: 218548741

Following gene: 218548738

Centisome position: 30.86

GC content: 47.67

Gene sequence:

>1611_bases
ATGAGAAGAATAGCCATTGTGGGAGGCGGACCCACCGGGATCTACACCTTAAACTCCCTCCTTGAACAGCAAACGCCGGT
TTCTGTCACTCTTTTTGAACAGGCTGATGAAGCGGGTGTCGGGATGCCCTACAGCGACGAAGATAACTCGAAAATCATGC
TGGCTAACATTGCGAGTATAGAAATCCCACCAGTAAATATTACTTATCTGGAATGGTTACAACAGCAGAGTGATGAGCAT
CTCGCGCGCTATGGTATTCAACGCGCTACGTTACACGACCGTCAGTTTTTGCCAAGGATCTTGCTCGGCGAATATTTTCG
TGCGCAATTTTTGCAATTGGTGAAGCGGGCTAAAGCACAACATTTTATAGTTAATATTCACGAGTCCTGCCGCGTCACCG
ATATCGAAGCTACGACAAAGGGCGTGCGTATATGGGCTGAAAACAGTAGCGATGCCGGGGAGTTCGATCTCGCTGTCATT
GCTACCGGGCACGTTTGGCCAGATGAAACACAAGCAACGAGATGTTATTTCCCCAGTCCATGGTCAGGATTAATGGAAGC
TAAAATTCCCCCCTGTAAAGTGGGAATTATGGGTACCTCACTTAGTGGACTGGATGCAGCAATGGCGGTTGCTATTCAGC
ACGGTAAGTTCACTGAGTCAGCCAATAAACAGTTGCGATTTCATCTCAATGAAAATAGTGACAATCTGGAGCTGACGCTG
ATGTCTCGTACAGGTGTCCTGCCGGAGGCCGATTTTTACTGCCCTATTCCCTACGAATCTTTAACTATCGTAACTGCTGC
AGCGATTGAACAAGAAATTGCAGCTGGCTCACAAGGTTTACTCAACAGGATATTCCGCCTGATTGTTGCGGAATTAGAAG
TTGCTGATCCCGCATGGTGCCAAAGCATTGCCTTAAATACTCTGGATGCAGATAGTTTTGCCACCGCCTGGTTTGCTGAG
CGGAAAAGTCATGATCCATTTCTGTGGGCAGAAGCGAATCTTCAGGAGGTAGAGCGAAATAAACGTCAGAAATATACTGT
GCCCTGGCGCTATACCATTTTGCGGCTACACGAGGTGGTTCAGGAAATCGTCCCTCACCTTAATGAGGAAGACAGTCAAC
GGTTTAGTAAGGGGCTCGCGCGGGTATTTATAGATAATTACGCGGCAATACCTTCCGAATCTATCCGCCGACTTCTGGCC
CTGCATAAAGCAGGCCTTATTACTGTACTTGCTCTGGGGAACGAGTATGAAATGACTGTTAACGAAACCGAGACTGTGAT
TACCACCACTGAGTGTAAATACACATTTGATCTGTTTATTGACGCGCGGGGCCAGCGGCCATTGAAGATTAATGATCTCC
CCTTTCCACGTTTACGCAAACAACTTGCTGCTTCCGGGGAGGATATTCCTGATATTGGCAGTGATTATACTTTACAGTCA
CCAGAGATTGTCCGTGGTCGCATTGCCTTTGCGGCACTCCCGTGGCTCATGCATGATCGTCCTTTCGTTCAGGGATTGAC
AGCATGTGCTGATATTGCTGAGTCGATGGCAAAAGCCATTTCTCAGTCCGCACCATCTCGCCGCAAGTATCTTATATACA
CCGAAGAATAG

Upstream 100 bases:

>100_bases
CCCGCTGGAACAATGCCCATTTTCATCCACACTTATCAGGTACGACGTTATTGCCTGGAAGACTGACAACCTTATAAACA
ATAAAAATGGGTAACTGATA

Downstream 100 bases:

>100_bases
AAAAACTGGAGATGGCAAGATTGTCATCTCCAGCTCTGTTATCCCGCAAGCGCTTTGATAACAGTCTCCATTGCCTGCTT
TTCCAGTTCTGTACGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MRRIAIVGGGPTGIYTLNSLLEQQTPVSVTLFEQADEAGVGMPYSDEDNSKIMLANIASIEIPPVNITYLEWLQQQSDEH
LARYGIQRATLHDRQFLPRILLGEYFRAQFLQLVKRAKAQHFIVNIHESCRVTDIEATTKGVRIWAENSSDAGEFDLAVI
ATGHVWPDETQATRCYFPSPWSGLMEAKIPPCKVGIMGTSLSGLDAAMAVAIQHGKFTESANKQLRFHLNENSDNLELTL
MSRTGVLPEADFYCPIPYESLTIVTAAAIEQEIAAGSQGLLNRIFRLIVAELEVADPAWCQSIALNTLDADSFATAWFAE
RKSHDPFLWAEANLQEVERNKRQKYTVPWRYTILRLHEVVQEIVPHLNEEDSQRFSKGLARVFIDNYAAIPSESIRRLLA
LHKAGLITVLALGNEYEMTVNETETVITTTECKYTFDLFIDARGQRPLKINDLPFPRLRKQLAASGEDIPDIGSDYTLQS
PEIVRGRIAFAALPWLMHDRPFVQGLTACADIAESMAKAISQSAPSRRKYLIYTEE

Sequences:

>Translated_536_residues
MRRIAIVGGGPTGIYTLNSLLEQQTPVSVTLFEQADEAGVGMPYSDEDNSKIMLANIASIEIPPVNITYLEWLQQQSDEH
LARYGIQRATLHDRQFLPRILLGEYFRAQFLQLVKRAKAQHFIVNIHESCRVTDIEATTKGVRIWAENSSDAGEFDLAVI
ATGHVWPDETQATRCYFPSPWSGLMEAKIPPCKVGIMGTSLSGLDAAMAVAIQHGKFTESANKQLRFHLNENSDNLELTL
MSRTGVLPEADFYCPIPYESLTIVTAAAIEQEIAAGSQGLLNRIFRLIVAELEVADPAWCQSIALNTLDADSFATAWFAE
RKSHDPFLWAEANLQEVERNKRQKYTVPWRYTILRLHEVVQEIVPHLNEEDSQRFSKGLARVFIDNYAAIPSESIRRLLA
LHKAGLITVLALGNEYEMTVNETETVITTTECKYTFDLFIDARGQRPLKINDLPFPRLRKQLAASGEDIPDIGSDYTLQS
PEIVRGRIAFAALPWLMHDRPFVQGLTACADIAESMAKAISQSAPSRRKYLIYTEE
>Mature_536_residues
MRRIAIVGGGPTGIYTLNSLLEQQTPVSVTLFEQADEAGVGMPYSDEDNSKIMLANIASIEIPPVNITYLEWLQQQSDEH
LARYGIQRATLHDRQFLPRILLGEYFRAQFLQLVKRAKAQHFIVNIHESCRVTDIEATTKGVRIWAENSSDAGEFDLAVI
ATGHVWPDETQATRCYFPSPWSGLMEAKIPPCKVGIMGTSLSGLDAAMAVAIQHGKFTESANKQLRFHLNENSDNLELTL
MSRTGVLPEADFYCPIPYESLTIVTAAAIEQEIAAGSQGLLNRIFRLIVAELEVADPAWCQSIALNTLDADSFATAWFAE
RKSHDPFLWAEANLQEVERNKRQKYTVPWRYTILRLHEVVQEIVPHLNEEDSQRFSKGLARVFIDNYAAIPSESIRRLLA
LHKAGLITVLALGNEYEMTVNETETVITTTECKYTFDLFIDARGQRPLKINDLPFPRLRKQLAASGEDIPDIGSDYTLQS
PEIVRGRIAFAALPWLMHDRPFVQGLTACADIAESMAKAISQSAPSRRKYLIYTEE

Specific function: Unknown

COG id: COG4529

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787957, Length=533, Percent_Identity=68.8555347091933, Blast_Score=795, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60130; Mature: 60130

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIAIVGGGPTGIYTLNSLLEQQTPVSVTLFEQADEAGVGMPYSDEDNSKIMLANIASI
CCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEE
EIPPVNITYLEWLQQQSDEHLARYGIQRATLHDRQFLPRILLGEYFRAQFLQLVKRAKAQ
ECCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HFIVNIHESCRVTDIEATTKGVRIWAENSSDAGEFDLAVIATGHVWPDETQATRCYFPSP
EEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCC
WSGLMEAKIPPCKVGIMGTSLSGLDAAMAVAIQHGKFTESANKQLRFHLNENSDNLELTL
CCCHHHCCCCCEEEEEECCCCCCHHHHHHHHEECCCCCCCCCCEEEEEECCCCCCEEEEE
MSRTGVLPEADFYCPIPYESLTIVTAAAIEQEIAAGSQGLLNRIFRLIVAELEVADPAWC
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
QSIALNTLDADSFATAWFAERKSHDPFLWAEANLQEVERNKRQKYTVPWRYTILRLHEVV
HHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCEECCCHHHHHHHHHHHH
QEIVPHLNEEDSQRFSKGLARVFIDNYAAIPSESIRRLLALHKAGLITVLALGNEYEMTV
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCEEEEE
NETETVITTTECKYTFDLFIDARGQRPLKINDLPFPRLRKQLAASGEDIPDIGSDYTLQS
CCCEEEEEEECCEEEEEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
PEIVRGRIAFAALPWLMHDRPFVQGLTACADIAESMAKAISQSAPSRRKYLIYTEE
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MRRIAIVGGGPTGIYTLNSLLEQQTPVSVTLFEQADEAGVGMPYSDEDNSKIMLANIASI
CCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEE
EIPPVNITYLEWLQQQSDEHLARYGIQRATLHDRQFLPRILLGEYFRAQFLQLVKRAKAQ
ECCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HFIVNIHESCRVTDIEATTKGVRIWAENSSDAGEFDLAVIATGHVWPDETQATRCYFPSP
EEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCC
WSGLMEAKIPPCKVGIMGTSLSGLDAAMAVAIQHGKFTESANKQLRFHLNENSDNLELTL
CCCHHHCCCCCEEEEEECCCCCCHHHHHHHHEECCCCCCCCCCEEEEEECCCCCCEEEEE
MSRTGVLPEADFYCPIPYESLTIVTAAAIEQEIAAGSQGLLNRIFRLIVAELEVADPAWC
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
QSIALNTLDADSFATAWFAERKSHDPFLWAEANLQEVERNKRQKYTVPWRYTILRLHEVV
HHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCEECCCHHHHHHHHHHHH
QEIVPHLNEEDSQRFSKGLARVFIDNYAAIPSESIRRLLALHKAGLITVLALGNEYEMTV
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCEEEEE
NETETVITTTECKYTFDLFIDARGQRPLKINDLPFPRLRKQLAASGEDIPDIGSDYTLQS
CCCEEEEEEECCEEEEEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
PEIVRGRIAFAALPWLMHDRPFVQGLTACADIAESMAKAISQSAPSRRKYLIYTEE
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023191; 9278503 [H]