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The map label for this gene is yniC [H]

Identifier: 218548704

GI number: 218548704

Start: 1376251

End: 1376919

Strand: Reverse

Name: yniC [H]

Synonym: EFER_1340

Alternate gene names: 218548704

Gene position: 1376919-1376251 (Counterclockwise)

Preceding gene: 218548706

Following gene: 218548703

Centisome position: 30.01

GC content: 50.97

Gene sequence:

>669_bases
ATGTCAACCCCACGCCAGATTCTGGCCGCAATTTTTGATATGGACGGATTACTTATCGACTCTGAACCGCTGTGGGATCG
CGCTGAACTGGACGTCATGGCCAGCCTTGGTGTTGATATCAGCCGTCGGCATGAGCTGCCTGATACACTTGGCCTGCGCA
TCGATATGGTGGTTGATCTTTGGTATTCCCACCAGCCGTGGATCGGGCCAAACCGGCAAGAAGTTGTTGATCGCGTCATT
TCACGTGCGATTTCGTTGATTGAAGAAACCCAACCACTGATGCCTGGCGTGCATGAGGCTATCGCATTATGTAAAGAACA
AGGAATGAAGGTGGGACTCGCTTCTGCGTCTCCGTTACATATGCTGGAAAAGGTGCTGACGATGTTTAATCTGCGTGACA
GCTTCGATGCACTGGCATCCGCAGAAAAACTGCCCTACAGCAAGCCACATCCACAGGTTTATCTCGACTGCGCAGCTAAA
CTGGGCGTTGATTCACTCAATTGTGTCGCTCTGGAAGATTCGGTGAATGGGATGATCGCGTCAAAAGCGGCTCGTATGCG
CTCCATCGTCGTTCCGGCGCAACACGATTTCGATGATCCCCGTTTTGTACTGGCAAACGTCAAACTCGCCTCATTAGAAG
AGCTAAATATTCATCATCTTCGCGGCTGA

Upstream 100 bases:

>100_bases
GATAACTGTTTTCGCCCGATCTTTAAAGACGGTATGATAAGCAACGATTCATCAGCAATACTGAATACCTTACATTTTAA
GTTCAAAAGGAGAGGTTGTA

Downstream 100 bases:

>100_bases
ATTATTATGGGCAATGCTTCATTGCCCATAATTTTTACGCTTCCGGTTTAACTGCTGAATTGCTCACCATTTTTTGACAA
ACAGTTACACCGTCACTACT

Product: 2-deoxyglucose-6-phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRHELPDTLGLRIDMVVDLWYSHQPWIGPNRQEVVDRVI
SRAISLIEETQPLMPGVHEAIALCKEQGMKVGLASASPLHMLEKVLTMFNLRDSFDALASAEKLPYSKPHPQVYLDCAAK
LGVDSLNCVALEDSVNGMIASKAARMRSIVVPAQHDFDDPRFVLANVKLASLEELNIHHLRG

Sequences:

>Translated_222_residues
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRHELPDTLGLRIDMVVDLWYSHQPWIGPNRQEVVDRVI
SRAISLIEETQPLMPGVHEAIALCKEQGMKVGLASASPLHMLEKVLTMFNLRDSFDALASAEKLPYSKPHPQVYLDCAAK
LGVDSLNCVALEDSVNGMIASKAARMRSIVVPAQHDFDDPRFVLANVKLASLEELNIHHLRG
>Mature_221_residues
STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRHELPDTLGLRIDMVVDLWYSHQPWIGPNRQEVVDRVIS
RAISLIEETQPLMPGVHEAIALCKEQGMKVGLASASPLHMLEKVLTMFNLRDSFDALASAEKLPYSKPHPQVYLDCAAKL
GVDSLNCVALEDSVNGMIASKAARMRSIVVPAQHDFDDPRFVLANVKLASLEELNIHHLRG

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=222, Percent_Identity=86.4864864864865, Blast_Score=390, Evalue=1e-110,
Organism=Escherichia coli, GI1789046, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787576, Length=189, Percent_Identity=30.6878306878307, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24656; Mature: 24525

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRHELPDTLGLRIDMVVDL
CCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHCCCHHHHEEE
WYSHQPWIGPNRQEVVDRVISRAISLIEETQPLMPGVHEAIALCKEQGMKVGLASASPLH
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCHHH
MLEKVLTMFNLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDSLNCVALEDSVNGMIA
HHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCCEEEEECCCCCHHHH
SKAARMRSIVVPAQHDFDDPRFVLANVKLASLEELNIHHLRG
HHHHHHHHEECCCCCCCCCCEEEEECCEEHHHHHCCHHHCCC
>Mature Secondary Structure 
STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRHELPDTLGLRIDMVVDL
CCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHCCCHHHHEEE
WYSHQPWIGPNRQEVVDRVISRAISLIEETQPLMPGVHEAIALCKEQGMKVGLASASPLH
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCHHH
MLEKVLTMFNLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDSLNCVALEDSVNGMIA
HHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCCEEEEECCCCCHHHH
SKAARMRSIVVPAQHDFDDPRFVLANVKLASLEELNIHHLRG
HHHHHHHHEECCCCCCCCCCEEEEECCEEHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]