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The map label for this gene is ynjA [H]

Identifier: 218548679

GI number: 218548679

Start: 1352145

End: 1352693

Strand: Reverse

Name: ynjA [H]

Synonym: EFER_1313

Alternate gene names: 218548679

Gene position: 1352693-1352145 (Counterclockwise)

Preceding gene: 218548680

Following gene: 218548678

Centisome position: 29.48

GC content: 55.37

Gene sequence:

>549_bases
ATGGGTTTACCACCGCTTAGCAAAATTCCTTTAAGTTTACGTCCGCAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGT
GCTAAGTCCAATTCGCTGGTGGGGACGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTCGGTTGGCTGGAGCGTA
AACGCTCACCGCTCGATCCGGTAGTGCGATCGCTTGTCAGCGCGCGCATTGCGCAAATGTGCCTGTGTGAGTTTTGCGTG
GATATCACCAGTATGAAAGTCGCCGAGCGTACCGGCAGCACCGATAAGTTGCTGGCAGTGGCTGACTGGCGACAAAGCCC
GCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTATGCCGAAGCCGCCAGCGTAACGCCACCAACAGTCGATGCTGCCC
TGCGTACCCGACTGGCTACGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCA
GCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAA

Upstream 100 bases:

>100_bases
CCTTCTGGTTTGTCACCGGACTGTTTATTCTGTTTGCCCTGACCGTGGTGATTTATATGGCGAAGAAAATATGGCTTGAA
CGCCAGAAGAGGAATGCCTG

Downstream 100 bases:

>100_bases
GGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCA
GGAAGTTAAAAATGAGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MGLPPLSKIPLSLRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCV
DITSMKVAERTGSTDKLLAVADWRQSPLFSDEERLALEYAEAASVTPPTVDAALRTRLATHFDAQALTELTALIGLQNLS
ARFNSAMDIPAQGLCRIPEKRS

Sequences:

>Translated_182_residues
MGLPPLSKIPLSLRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCV
DITSMKVAERTGSTDKLLAVADWRQSPLFSDEERLALEYAEAASVTPPTVDAALRTRLATHFDAQALTELTALIGLQNLS
ARFNSAMDIPAQGLCRIPEKRS
>Mature_181_residues
GLPPLSKIPLSLRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVD
ITSMKVAERTGSTDKLLAVADWRQSPLFSDEERLALEYAEAASVTPPTVDAALRTRLATHFDAQALTELTALIGLQNLSA
RFNSAMDIPAQGLCRIPEKRS

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=182, Percent_Identity=97.8021978021978, Blast_Score=363, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 20507; Mature: 20376

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPPLSKIPLSLRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
VVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVADWRQSPLFSDEERLALEYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHCCCCCCCCCCHHHHHHHHH
EAASVTPPTVDAALRTRLATHFDAQALTELTALIGLQNLSARFNSAMDIPAQGLCRIPEK
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
RS
CC
>Mature Secondary Structure 
GLPPLSKIPLSLRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
VVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVADWRQSPLFSDEERLALEYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHCCCCCCCCCCHHHHHHHHH
EAASVTPPTVDAALRTRLATHFDAQALTELTALIGLQNLSARFNSAMDIPAQGLCRIPEK
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]