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The map label for this gene is ycfZ [H]

Identifier: 218548651

GI number: 218548651

Start: 1324890

End: 1325675

Strand: Reverse

Name: ycfZ [H]

Synonym: EFER_1285

Alternate gene names: 218548651

Gene position: 1325675-1324890 (Counterclockwise)

Preceding gene: 218548652

Following gene: 218548645

Centisome position: 28.89

GC content: 43.77

Gene sequence:

>786_bases
ATGAAAAAAATCATAATACTGCTCAGTTTACTGATACTTCTGCCTCTGACGGCAACCAGTAAGCCATTGATTCCAATAAT
GAAGACACTTTTTACGGATGTTACAGGTACTGTACCGGATGCTGAGGAGATTGCGCGGAAAGCGGAGCTTTTTCGTCAAC
AAACCGGGATTGCGCCGTTTATCGTGGTTGTACCTGGCGTTAATGAAGCAAGCTTCAGGCAAAATGGCAAAGCGATGCTG
GCGCATGCGTCATCTTCATTGAATGATGTAAAAGGAAGTGTTCTGTTACTTTTTACTACCCGCGAACCACGGTTAATTAT
GATAACCAACGGCCAGGTTGAAAGCAGCATGGACGATAAACATCTCGGCCTTCTGGTAGAAAATCATACGCTGGCTTATT
TACATGCAGATCTCTGGTATCAGGGAATCAATAATGCATTGGCTATTTTACAAGCACAGATATTAAAACAACCGACGCCA
CCACTGACATATTACCCGCATCCAGAACAACTGCATGAGAATGCTCCTCCTGGCAGTACCACGACATTAGGCCTTTTTGC
CTGGGCTGTTGCATTCATCGTCTTTACTGCATTTTTTAACTACACAACGCGCCTTAATTATGCATTAAAGTTTGCAGTGG
CGATGACTATTGCCAATATGGGTTATCAGGCTTTATGTTTGTATATCGATGACAGCTTTGCGATTACCAGAATATCGCCG
CTCTGGGCTGGGCTGATTGGTGTTTGTACGTTTATTGCCGCGTTGTTATTGACGAGTAAACGGTAA

Upstream 100 bases:

>100_bases
GGGGGTTTATCGGCATTATGGGCGTTATTTTTATCGCCGTCGGTTTATTAATCAGTATGTCCTCCTCTAAAAAGACACGC
AGGAAACGGAAGTCCCGCCC

Downstream 100 bases:

>100_bases
AAGAGGCAGTAAATTGTGCGTGTATTATGCCGGATGCGGCGCGAACGCCTTATCCGGCCCACAAAATCCGCAAATTCAAT
TAATTGCGCCCCTTGTAGGC

Product: hypothetical protein

Products: nicotinate; N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKKIIILLSLLILLPLTATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVVVPGVNEASFRQNGKAML
AHASSSLNDVKGSVLLLFTTREPRLIMITNGQVESSMDDKHLGLLVENHTLAYLHADLWYQGINNALAILQAQILKQPTP
PLTYYPHPEQLHENAPPGSTTTLGLFAWAVAFIVFTAFFNYTTRLNYALKFAVAMTIANMGYQALCLYIDDSFAITRISP
LWAGLIGVCTFIAALLLTSKR

Sequences:

>Translated_261_residues
MKKIIILLSLLILLPLTATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVVVPGVNEASFRQNGKAML
AHASSSLNDVKGSVLLLFTTREPRLIMITNGQVESSMDDKHLGLLVENHTLAYLHADLWYQGINNALAILQAQILKQPTP
PLTYYPHPEQLHENAPPGSTTTLGLFAWAVAFIVFTAFFNYTTRLNYALKFAVAMTIANMGYQALCLYIDDSFAITRISP
LWAGLIGVCTFIAALLLTSKR
>Mature_261_residues
MKKIIILLSLLILLPLTATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVVVPGVNEASFRQNGKAML
AHASSSLNDVKGSVLLLFTTREPRLIMITNGQVESSMDDKHLGLLVENHTLAYLHADLWYQGINNALAILQAQILKQPTP
PLTYYPHPEQLHENAPPGSTTTLGLFAWAVAFIVFTAFFNYTTRLNYALKFAVAMTIANMGYQALCLYIDDSFAITRISP
LWAGLIGVCTFIAALLLTSKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787365, Length=262, Percent_Identity=88.5496183206107, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.2.21

Molecular weight: Translated: 28732; Mature: 28732

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIILLSLLILLPLTATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPF
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
IVVVPGVNEASFRQNGKAMLAHASSSLNDVKGSVLLLFTTREPRLIMITNGQVESSMDDK
EEEECCCCHHHHHCCCCEEEEECCCCHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCC
HLGLLVENHTLAYLHADLWYQGINNALAILQAQILKQPTPPLTYYPHPEQLHENAPPGST
CEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCC
TTLGLFAWAVAFIVFTAFFNYTTRLNYALKFAVAMTIANMGYQALCLYIDDSFAITRISP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEHHH
LWAGLIGVCTFIAALLLTSKR
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIIILLSLLILLPLTATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPF
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
IVVVPGVNEASFRQNGKAMLAHASSSLNDVKGSVLLLFTTREPRLIMITNGQVESSMDDK
EEEECCCCHHHHHCCCCEEEEECCCCHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCC
HLGLLVENHTLAYLHADLWYQGINNALAILQAQILKQPTPPLTYYPHPEQLHENAPPGST
CEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCC
TTLGLFAWAVAFIVFTAFFNYTTRLNYALKFAVAMTIANMGYQALCLYIDDSFAITRISP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEHHH
LWAGLIGVCTFIAALLLTSKR
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-nicotinate D-ribonucleotide; dimethylbenzimidazole

Specific reaction: beta-nicotinate D-ribonucleotide + dimethylbenzimidazole = nicotinate + N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]