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The map label for this gene is yeaB [H]

Identifier: 218548629

GI number: 218548629

Start: 1301778

End: 1302356

Strand: Reverse

Name: yeaB [H]

Synonym: EFER_1263

Alternate gene names: 218548629

Gene position: 1302356-1301778 (Counterclockwise)

Preceding gene: 218548630

Following gene: 218548628

Centisome position: 28.38

GC content: 51.64

Gene sequence:

>579_bases
GTGGAATACAGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACAGGGAAACGTT
AAATCATCGTCAGGCTGCCGTGTTGATCCCCATTGTACGCCGACCACAGCCAGGGTTATTGCTTACCCAACGCTCCATTC
ATCTGCGTAAACACGCCGGACAGGTGGCTTTTCCTGGCGGTGCGGTTGATGACACCGACACATCAGTCATTGCCGCCGCG
CTTCGCGAAGCTGAAGAAGAGGTTGCTATTCCGCCTTCCTCGGTCGAGGTTATAGGCGTACTACCGCCAGTCGATAGCGT
CACTGGCTACCAGGTAACGCCAGTAGTCGGCATTATTCCCCCAGATTTACCCTATCATGCCAGCGAAGATGAAGTATCCG
CAGTGTTTGAAATGCCCCTCGCTCAGGCGCTTCATCTGGGCCGTTATCACCCTTTAGATATCTACCGCCGTGGTGATTCA
CATCGGGTATGGCTTTCCTGGTATGAACACTATTTTGTATGGGGAATGACAGCAGGCATAATTCGTGAGCTGGCGCTGCA
AATTGGTGTTAAACCCTGA

Upstream 100 bases:

>100_bases
CCGCTGGCGGTGGTATTGTCGCTGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATAAGATCCTA
CGTCAACTGGAGAAATAAAC

Downstream 100 bases:

>100_bases
CTATACTTATCTTTACACGCACAAAACACTACTTGAGACAATCATCGCAATATTAGTTAAATCGCGGTTTTTGATTAGTT
TAATTCATGTGAATAGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEYSSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDTSVIAAA
LREAEEEVAIPPSSVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYHASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEHYFVWGMTAGIIRELALQIGVKP

Sequences:

>Translated_192_residues
MEYSSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDTSVIAAA
LREAEEEVAIPPSSVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYHASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEHYFVWGMTAGIIRELALQIGVKP
>Mature_192_residues
MEYSSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDTSVIAAA
LREAEEEVAIPPSSVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYHASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEHYFVWGMTAGIIRELALQIGVKP

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=182, Percent_Identity=35.7142857142857, Blast_Score=86, Evalue=2e-17,
Organism=Escherichia coli, GI1788115, Length=192, Percent_Identity=96.875, Blast_Score=348, Evalue=2e-97,
Organism=Caenorhabditis elegans, GI17536993, Length=117, Percent_Identity=41.025641025641, Blast_Score=76, Evalue=9e-15,
Organism=Drosophila melanogaster, GI18859683, Length=153, Percent_Identity=35.9477124183007, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21431; Mature: 21431

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYSSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG
CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCC
QVAFPGGAVDDTDTSVIAAALREAEEEVAIPPSSVEVIGVLPPVDSVTGYQVTPVVGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCEEEECC
PDLPYHASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEHYFVWGMTAGI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEHHHHHHHHHHHHHHHHH
IRELALQIGVKP
HHHHHHHHCCCC
>Mature Secondary Structure
MEYSSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG
CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCC
QVAFPGGAVDDTDTSVIAAALREAEEEVAIPPSSVEVIGVLPPVDSVTGYQVTPVVGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCEEEECC
PDLPYHASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEHYFVWGMTAGI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEHHHHHHHHHHHHHHHHH
IRELALQIGVKP
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA