| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218548511
Identifier: 218548511
GI number: 218548511
Start: 1180737
End: 1181711
Strand: Direct
Name: 218548511
Synonym: EFER_1140
Alternate gene names: NA
Gene position: 1180737-1181711 (Clockwise)
Preceding gene: 218548509
Following gene: 218548512
Centisome position: 25.73
GC content: 49.33
Gene sequence:
>975_bases TTGCCGGAGTGGATCATGATCTGGCGATGGGGATGCCTGTTGCTGCTGATGTTATCAGGCAGTTGTTGGGCAGTTTGTAG TGTTAATACCACTAACGGTGCTTTGGGTACGGTTACGTCATTTGCCGTTAACAACACGGTACAAACGACCAGTGCCAGTC TTATTGTGCAATGTGACAAAGTTATCGGCTTGCTAACCAACGATACAGTAAAGCTCACTTACACCGGAGCCACGACATCT GCGACCAACCGTGCAATATTAAAGCGCAGCGATAATAGCAGTGTTGCCGATGCAATCCCCGTCCGACTCTGTACTCAAGC GGCATGTGCCGGTAATAGTGATATTAATATTGGTGGAAGCTATACCTGGAGCGGTAGCACATTATTGGATTTATTGGTCA CAGCACGCTATACCCTGCCGCTGTATTTCGCCACGACCACCGGACAAAATGTTAGTGCCGGGCCGTATCAGGTCACACTG AATTTCAGTGTTACTTACAATATTTGTGCTGCGGGTGTTGGGATCTGCCTGAGTCCGCAAACGGATACTGTAGTGCGTAC CCTTCAGCTCAATCTCACTGTCACCAACGATTGCATTACCATCACTGCTCCCAACGTTAATTTTGGCAGTGCGCCACTGG CAAAAAACTTCCCGGTCGTTGCGCAAGCGGTAGCGGTAACCTGTACCAAAGGCAGTAGTTACACCATTGGTATCAATAAC GGTAGTTACGCCACTGGAACGGTACGCAATATGGCAAACGGTAATAACCGCCTGAGCTATGAAATCTATAAAGAAAACAG CACTAACCGTTGGGGCAGCACGGGTACGGAACGTTGGGCCAGTAGTGCATCCTCAGAGACCAGCAGTGACGGTCTTTTAA AAACGTATAGCTACACGGCCAGAGTACTGCCCAACCAGACCACGCCTCCTGCCGGTACCTATAGCGATGTTGTCGTGGTA GATATTGCCTTCTGA
Upstream 100 bases:
>100_bases ATCTACTGCACGCCATCACACCGGATGGCAAACAATGTCAAACACGCTTATCGTTGACGCCCAATCCGCAACATAAATTA AAAACTTACGGTCCGTTGGT
Downstream 100 bases:
>100_bases ATAAAGTTTCCTGCCTTTCTGCCGATAACGAGGTTAACTCTTTATCAGGAAGGTGCCTTATGTTTAACCGTATCCGCGTA GTCACGCTGCTGATAATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Spore Coat U Domain Protein; Type I Pili Chaperone-Usher Pili Assembly System); Spore Coat Protein U Domain-Contain Protein; Type 1 Pili Protein CsuE; Type I Pilus Protein CsuE; Spore Coat U; CsuE Protein; Sigma-Fimbriae Tip Adhesin; Fimbrial Adhesin; Fimbrial Protein; Lipoprotein
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MPEWIMIWRWGCLLLLMLSGSCWAVCSVNTTNGALGTVTSFAVNNTVQTTSASLIVQCDKVIGLLTNDTVKLTYTGATTS ATNRAILKRSDNSSVADAIPVRLCTQAACAGNSDINIGGSYTWSGSTLLDLLVTARYTLPLYFATTTGQNVSAGPYQVTL NFSVTYNICAAGVGICLSPQTDTVVRTLQLNLTVTNDCITITAPNVNFGSAPLAKNFPVVAQAVAVTCTKGSSYTIGINN GSYATGTVRNMANGNNRLSYEIYKENSTNRWGSTGTERWASSASSETSSDGLLKTYSYTARVLPNQTTPPAGTYSDVVVV DIAF
Sequences:
>Translated_324_residues MPEWIMIWRWGCLLLLMLSGSCWAVCSVNTTNGALGTVTSFAVNNTVQTTSASLIVQCDKVIGLLTNDTVKLTYTGATTS ATNRAILKRSDNSSVADAIPVRLCTQAACAGNSDINIGGSYTWSGSTLLDLLVTARYTLPLYFATTTGQNVSAGPYQVTL NFSVTYNICAAGVGICLSPQTDTVVRTLQLNLTVTNDCITITAPNVNFGSAPLAKNFPVVAQAVAVTCTKGSSYTIGINN GSYATGTVRNMANGNNRLSYEIYKENSTNRWGSTGTERWASSASSETSSDGLLKTYSYTARVLPNQTTPPAGTYSDVVVV DIAF >Mature_323_residues PEWIMIWRWGCLLLLMLSGSCWAVCSVNTTNGALGTVTSFAVNNTVQTTSASLIVQCDKVIGLLTNDTVKLTYTGATTSA TNRAILKRSDNSSVADAIPVRLCTQAACAGNSDINIGGSYTWSGSTLLDLLVTARYTLPLYFATTTGQNVSAGPYQVTLN FSVTYNICAAGVGICLSPQTDTVVRTLQLNLTVTNDCITITAPNVNFGSAPLAKNFPVVAQAVAVTCTKGSSYTIGINNG SYATGTVRNMANGNNRLSYEIYKENSTNRWGSTGTERWASSASSETSSDGLLKTYSYTARVLPNQTTPPAGTYSDVVVVD IAF
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34289; Mature: 34158
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEWIMIWRWGCLLLLMLSGSCWAVCSVNTTNGALGTVTSFAVNNTVQTTSASLIVQCDK CCCEEEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCEEEECCCEEEEEECC VIGLLTNDTVKLTYTGATTSATNRAILKRSDNSSVADAIPVRLCTQAACAGNSDINIGGS EEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCE YTWSGSTLLDLLVTARYTLPLYFATTTGQNVSAGPYQVTLNFSVTYNICAAGVGICLSPQ EEECCHHHHHHHHHHHEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCEEEECCC TDTVVRTLQLNLTVTNDCITITAPNVNFGSAPLAKNFPVVAQAVAVTCTKGSSYTIGINN CCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECC GSYATGTVRNMANGNNRLSYEIYKENSTNRWGSTGTERWASSASSETSSDGLLKTYSYTA CCEECCEEHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEE RVLPNQTTPPAGTYSDVVVVDIAF EECCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure PEWIMIWRWGCLLLLMLSGSCWAVCSVNTTNGALGTVTSFAVNNTVQTTSASLIVQCDK CCEEEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCEEEECCCEEEEEECC VIGLLTNDTVKLTYTGATTSATNRAILKRSDNSSVADAIPVRLCTQAACAGNSDINIGGS EEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCE YTWSGSTLLDLLVTARYTLPLYFATTTGQNVSAGPYQVTLNFSVTYNICAAGVGICLSPQ EEECCHHHHHHHHHHHEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCEEEECCC TDTVVRTLQLNLTVTNDCITITAPNVNFGSAPLAKNFPVVAQAVAVTCTKGSSYTIGINN CCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECC GSYATGTVRNMANGNNRLSYEIYKENSTNRWGSTGTERWASSASSETSSDGLLKTYSYTA CCEECCEEHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEE RVLPNQTTPPAGTYSDVVVVDIAF EECCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA