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The map label for this gene is ymbA [H]

Identifier: 218548461

GI number: 218548461

Start: 1135041

End: 1135589

Strand: Direct

Name: ymbA [H]

Synonym: EFER_1089

Alternate gene names: 218548461

Gene position: 1135041-1135589 (Clockwise)

Preceding gene: 218548460

Following gene: 218548462

Centisome position: 24.74

GC content: 53.37

Gene sequence:

>549_bases
GTGACGATTGCGGCACTGTGGCTGGCCGGATGCAGCTCCGGCGAGATTAATAAAAACTATTACCAGTTACCTGTGGTGCA
GAGCGGTACACAAAGTACCGCCAGCCAGGGTAATCGCCTGTTATGGGTAGAGCAGGTCGCTGTTCCTGACTATCTGGCGG
GGAATGGTGTGGTTTATCAAACCAGTGATGTGAAGTATGTGATTGCCAACAACAACTTGTGGGCCAGCCCGTTGGATCAA
CAGTTGCGCAACACCCTGGTTGCCAACCTGAGCACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGC
CCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTCGCTATGATGGCAAGGTCATTGTCAGTGGTGAGTGGCTGT
TGAACCACCAGGGACAACTGATCAAACGTCCGTTCCGTCTGGAAGGGGTGCAAACTCAGGATGGTTACGATGAGATGGTT
AAAGTGCTGGCCAGTGTCTGGAGTCAGGAAGCCTCTTCTATTGCGCAAGAGATAAAGCGTCTACCTTAA

Upstream 100 bases:

>100_bases
TACTGAAAACGCTCAACGAGAAGAGTAACGCGCTGGTATTTGAAGCGAAGGACAAAAAAGATCCAGAGCCGAAGAGGGCG
AAACAATGAAAAAGTGGCTA

Downstream 100 bases:

>100_bases
TTATAAAGATTTGTAAATATAACCGTCTCCGGTTTGTTGCCTGAGGCGGTTTTTTTGTTTCTAACGTGTGGAAAAAGTTG
TTCCTCTTCACATTTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQ
QLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMV
KVLASVWSQEASSIAQEIKRLP

Sequences:

>Translated_182_residues
MTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQ
QLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMV
KVLASVWSQEASSIAQEIKRLP
>Mature_181_residues
TIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQ
LRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMVK
VLASVWSQEASSIAQEIKRLP

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693109, Length=182, Percent_Identity=97.8021978021978, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005586 [H]

Pfam domain/function: PF03886 DUF330 [H]

EC number: NA

Molecular weight: Translated: 19996; Mature: 19865

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQ
CEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHCCCEEEEEEEECCCCEECCCCEEEE
TSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTVTEFNG
ECCEEEEEECCCEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEEECC
RYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMVKVLASVWSQEASSIAQEIKR
CCCCEEEEECCEEECCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
LP
CC
>Mature Secondary Structure 
TIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQ
EEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHCCCEEEEEEEECCCCEECCCCEEEE
TSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTVTEFNG
ECCEEEEEECCCEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEEECC
RYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMVKVLASVWSQEASSIAQEIKR
CCCCEEEEECCEEECCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
LP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]