Click here to switch to the map view.

The map label for this gene is ycbW [H]

Identifier: 218548455

GI number: 218548455

Start: 1126234

End: 1126776

Strand: Direct

Name: ycbW [H]

Synonym: EFER_1083

Alternate gene names: 218548455

Gene position: 1126234-1126776 (Clockwise)

Preceding gene: 218548454

Following gene: 218548457

Centisome position: 24.54

GC content: 47.15

Gene sequence:

>543_bases
ATGCGAATTAAACCTGACGATAACTGGCGCTGGTATTATGATGAAGAGCACGATCGAATGATGCTCGATTTAGCCAATGG
TATGTTATTTCGCTCGCGTTTTGCTCGTAAAATGCTCACGCCAGATGCCTTTAATCCCTCCGGTTTTTGTGTTGATGATG
CAGCGCTCTATTTTTCTTTTGAAGAAAAATGCCGTGACCTGCCGTTATCCAAAGAACAGAAAGCTGAGTTAGTGCTTAAT
GCACTGGTAGCAATTCGTTATCTCAAGCCGCAAATGCCGAAAAGCTGGCATTTTATATCTCATGGCGAAATGTGGGCACC
AATGCCCGGTGATGCCGCTTGTGTCTGGTTGAGCGATACTCACGAGCAGGTCAATTTGCTGGTCGTTGAATCTGGCGAAA
ATGCTGCACTGTGCCTGTTGGCGCAACCCTGCGTTGTTATTGCTGGTCGCGCGATGCAGTTGGGGGACGCCATCAAAATC
ATGAATGACAGGCTGAAACCGCAGGTTAATGTTGACAGTTTCAGCCTCGAACAGGCAGTTTAA

Upstream 100 bases:

>100_bases
CTGTTGCTTATTTATACATTTTAGTCTTTTCTTATTTAGGGCAATAAACGAAGCGGCAAAGGACAATGTTGCGCAGAATG
ATTTAGGTGGGAGAATCCGC

Downstream 100 bases:

>100_bases
CGCGCTAGTTTGAGCGCAGTCTTCGGCACACAACTACAGCAAAGAATAGTGCCATCATTGCTGATTGCTGATTTTTTGAG
CGGTGTGACTTCGCCTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFNPSGFCVDDAALYFSFEEKCRDLPLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFISHGEMWAPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV

Sequences:

>Translated_180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFNPSGFCVDDAALYFSFEEKCRDLPLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFISHGEMWAPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV
>Mature_180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFNPSGFCVDDAALYFSFEEKCRDLPLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFISHGEMWAPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=180, Percent_Identity=96.6666666666667, Blast_Score=365, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 20567; Mature: 20567

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFNPSGFCVDDAALYFSF
CCCCCCCCEEEEEECCCCEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEEH
EEKCRDLPLSKEQKAELVLNALVAIRYLKPQMPKSWHFISHGEMWAPMPGDAACVWLSDT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCEEEEEEECC
HEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV
CCEEEEEEEECCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCEECCCCCCHHHCC
>Mature Secondary Structure
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFNPSGFCVDDAALYFSF
CCCCCCCCEEEEEECCCCEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEEH
EEKCRDLPLSKEQKAELVLNALVAIRYLKPQMPKSWHFISHGEMWAPMPGDAACVWLSDT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCEEEEEEECC
HEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV
CCEEEEEEEECCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCEECCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]