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The map label for this gene is yliC [H]

Identifier: 218548350

GI number: 218548350

Start: 1003106

End: 1004026

Strand: Direct

Name: yliC [H]

Synonym: EFER_0972

Alternate gene names: 218548350

Gene position: 1003106-1004026 (Clockwise)

Preceding gene: 218548349

Following gene: 218548351

Centisome position: 21.86

GC content: 52.12

Gene sequence:

>921_bases
ATGCTTAATTATGTACTCAAGCGCCTGCTGGGGCTGATCCCAACACTGCTGATTGTGGCGGTGTTGGTGTTTTTATTTGT
CCATCTGCTGCCAGGTGACCCCGCACGTTTGATTGCCGGGCCGGAAGCTGACGCACAGGTAATTGAACTGGTGCGCCAAC
AGTTAGGGCTGGATAAGCCATTACACGTTCAGTTCTGGCATTACATCACCAGTGTAGTGCAGGGCGATTTTGGCACGTCG
ATGGTTTCTCGTCGCCCGGTATCTGAAGAGATCGCCAGTCGCTTTATGCCGACATTATGGCTAACTCTTACCAGTATGAT
CTGGGCTGTCTTGTTTGGTATGGCGGCAGGAATTGTCGCCGCTGTCTGGCGTAATCGCTGGCCAGATCGTCTTAGTATGA
CGCTGGCGGTATCGGGTATTTCCTTTCCGGCCTTTGCCCTTGGCATATTGCTGATGCAGATCTTTTCCGTTGAGCTTGGT
TGGTTGCCGACAGTGGGCGCTGAAAGCTGGCAACACTATATTTTGCCATCTGTTACCCTGGGTGCTGCGGTGGCATCGGT
AATGGCGCGTTTTACCCGAGCTTCTTTTGTCGATGTGCTGAGCGAAGATTATATGCGCACAGCACGAGCCAAAGGGGTGA
GCGAAACCTGGGTTGTGCTAAAACATGGGCTGCGTAATGCCATGATCCCGGTGGTAACCATGATGGGGCTACAGTTTGGC
TTTCTGCTGGGCGGATCGATTGTCGTCGAAAAAGTGTTTAACTGGCCGGGGCTGGGGCGTTTGCTGGTCGATTCGGTGGA
AATGCGAGATTACCCGGTAATTCAGGCGGAAGTGCTGCTATTTTCGCTGGAGTTTATTCTAATCAACTTGCTGGTGGATG
TTCTGTACGCCGCCATCAATCCCGCAATCAGGTACAAGTAA

Upstream 100 bases:

>100_bases
TCGGCGCACAGTAAGAATTTGACAGGCTTTTGGATTATGCCCGATACCGGTTTCAGTTTTGATGATGCAGATTTGCAATA
AGCAATAATCAAGGAGTTGA

Downstream 100 bases:

>100_bases
GGATGCAATTATTTAACTGGCGCCGTCAGGCGATCATGAAGTCTATGCCACTGGTTGAACCTGGGCAGGTGAGGACCCCC
TGGTATGAGTTCTGGCGTCG

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEADAQVIELVRQQLGLDKPLHVQFWHYITSVVQGDFGTS
MVSRRPVSEEIASRFMPTLWLTLTSMIWAVLFGMAAGIVAAVWRNRWPDRLSMTLAVSGISFPAFALGILLMQIFSVELG
WLPTVGAESWQHYILPSVTLGAAVASVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDVLYAAINPAIRYK

Sequences:

>Translated_306_residues
MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEADAQVIELVRQQLGLDKPLHVQFWHYITSVVQGDFGTS
MVSRRPVSEEIASRFMPTLWLTLTSMIWAVLFGMAAGIVAAVWRNRWPDRLSMTLAVSGISFPAFALGILLMQIFSVELG
WLPTVGAESWQHYILPSVTLGAAVASVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDVLYAAINPAIRYK
>Mature_306_residues
MLNYVLKRLLGLIPTLLIVAVLVFLFVHLLPGDPARLIAGPEADAQVIELVRQQLGLDKPLHVQFWHYITSVVQGDFGTS
MVSRRPVSEEIASRFMPTLWLTLTSMIWAVLFGMAAGIVAAVWRNRWPDRLSMTLAVSGISFPAFALGILLMQIFSVELG
WLPTVGAESWQHYILPSVTLGAAVASVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG
FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLLVDVLYAAINPAIRYK

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=91.5032679738562, Blast_Score=576, Evalue=1e-166,
Organism=Escherichia coli, GI1789965, Length=342, Percent_Identity=43.5672514619883, Blast_Score=263, Evalue=8e-72,
Organism=Escherichia coli, GI1789888, Length=308, Percent_Identity=39.9350649350649, Blast_Score=218, Evalue=3e-58,
Organism=Escherichia coli, GI1787761, Length=306, Percent_Identity=39.8692810457516, Blast_Score=209, Evalue=1e-55,
Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=35.7142857142857, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=30.7692307692308, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=26.4462809917355, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33998; Mature: 33998

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCC
>Mature Secondary Structure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HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA