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The map label for this gene is yfaZ [H]

Identifier: 218548300

GI number: 218548300

Start: 934964

End: 935506

Strand: Direct

Name: yfaZ [H]

Synonym: EFER_0919

Alternate gene names: 218548300

Gene position: 934964-935506 (Clockwise)

Preceding gene: 218548298

Following gene: 218548301

Centisome position: 20.38

GC content: 53.22

Gene sequence:

>543_bases
ATGAAAAAAAATGCAATTGCCGCGCTGATGGGCATGTTGTTAATCTCCGCTTCGGCGAATGCTATCAGTATCAGCGGTCA
GGCGGGTAAAGACTACACCAATGTCGGCGTCGGTTTAGGAACGGAATCCAGTGGTCTCGCACTGAGCGGTAACTGGACAC
ATAGCGACGACGATGGCGACGTTGCAGGCCTTGGACTGGGGCTGAATTTGCCAGTGGGGCCGCTGTTAGCGACTGTTGGC
GGTAAAGGTATTTATACCAATCCGAATGATGGTGAGGAAGGCTATGCCGCTGCTGTTGGTGGTGGTTTGCAGTGGCAGAT
TGGCGACAGCTTCCGTCTGTTTGGTGAGTATTATTACTCCCCGGACTCGCTTTCCAGTGGCATCGACAGCTACCAGGAAG
CTAACGCTGGGGCGCGTTTCACCATTATGCGTCCGCTCAGCATTGAGGCTGGTTATCGCTACCTCAATCTGGCAGGTAAA
GATGGTCATCGCGATAACGCCATCGCTGACGGTCCATATGTTGGCGTTAACGCCAGTTTCTGA

Upstream 100 bases:

>100_bases
CGCGATTAGATCGCCAGATTAGATCATTGATTCCTTTGCAACTGTCAGTACAATCCCCGCGATTTTTGGGAAGTTTATTG
ATGATTTTAAAAGGGTAACG

Downstream 100 bases:

>100_bases
TGCCTTCCGGCGCGGCCTTCTGTCGCGCCATTCAGTTTCTTACTACGCCTTATCTCCCTTTGCGTTATAGTGATTCGATA
ACAAAAGCAGGAGATAACCA

Product: outer membrane porin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKKNAIAALMGMLLISASANAISISGQAGKDYTNVGVGLGTESSGLALSGNWTHSDDDGDVAGLGLGLNLPVGPLLATVG
GKGIYTNPNDGEEGYAAAVGGGLQWQIGDSFRLFGEYYYSPDSLSSGIDSYQEANAGARFTIMRPLSIEAGYRYLNLAGK
DGHRDNAIADGPYVGVNASF

Sequences:

>Translated_180_residues
MKKNAIAALMGMLLISASANAISISGQAGKDYTNVGVGLGTESSGLALSGNWTHSDDDGDVAGLGLGLNLPVGPLLATVG
GKGIYTNPNDGEEGYAAAVGGGLQWQIGDSFRLFGEYYYSPDSLSSGIDSYQEANAGARFTIMRPLSIEAGYRYLNLAGK
DGHRDNAIADGPYVGVNASF
>Mature_180_residues
MKKNAIAALMGMLLISASANAISISGQAGKDYTNVGVGLGTESSGLALSGNWTHSDDDGDVAGLGLGLNLPVGPLLATVG
GKGIYTNPNDGEEGYAAAVGGGLQWQIGDSFRLFGEYYYSPDSLSSGIDSYQEANAGARFTIMRPLSIEAGYRYLNLAGK
DGHRDNAIADGPYVGVNASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082072, Length=180, Percent_Identity=84.4444444444444, Blast_Score=288, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR009998 [H]

Pfam domain/function: PF07437 YfaZ [H]

EC number: NA

Molecular weight: Translated: 18504; Mature: 18504

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNAIAALMGMLLISASANAISISGQAGKDYTNVGVGLGTESSGLALSGNWTHSDDDGD
CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCC
VAGLGLGLNLPVGPLLATVGGKGIYTNPNDGEEGYAAAVGGGLQWQIGDSFRLFGEYYYS
EEEEEECCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEECCCEEEEECCCEEEEEEEEEC
PDSLSSGIDSYQEANAGARFTIMRPLSIEAGYRYLNLAGKDGHRDNAIADGPYVGVNASF
CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MKKNAIAALMGMLLISASANAISISGQAGKDYTNVGVGLGTESSGLALSGNWTHSDDDGD
CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCC
VAGLGLGLNLPVGPLLATVGGKGIYTNPNDGEEGYAAAVGGGLQWQIGDSFRLFGEYYYS
EEEEEECCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEECCCEEEEECCCEEEEEEEEEC
PDSLSSGIDSYQEANAGARFTIMRPLSIEAGYRYLNLAGKDGHRDNAIADGPYVGVNASF
CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]