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The map label for this gene is yfbK [H]

Identifier: 218548279

GI number: 218548279

Start: 913983

End: 915614

Strand: Direct

Name: yfbK [H]

Synonym: EFER_0898

Alternate gene names: 218548279

Gene position: 913983-915614 (Clockwise)

Preceding gene: 218548276

Following gene: 218548282

Centisome position: 19.92

GC content: 44.06

Gene sequence:

>1632_bases
TTGCTGCCTCTCTGGTTTTGTCAAATAAAAGGAATTTATATGCGTGTCAATAAAATATACATAATATCTATATGTGGAGT
GCTACTTAGTGGATGCAGTTCCTCAGTCAGCTCTCCACAAGCAGAGGAAAGATGGCATTATGTGACCATGAGTGCATACG
CACCTTCACCAGTGCAACAAGGTCAATTGCAACAAAATACCGCCCGTTACACACATCATGAAGCTAACCCGATAAAACAA
ACCGCACAAGAACCGCTGGCGACCTTTAGCTTTGATGTTGATACAGGAAGTTATGCCAATGTCCGGCGCTTTCTGAAAAC
GGGTTCATTACCTGGTGCAGATGTCGTGCGTGTTGAAGAGTTGGTTAACTACTTTCCTTTAACCGAAGCAACAAAGAAAA
ATATTCCTGGATGCAAAGGTTGTGAAGAAAATTCTCCTTTTAGCATCAACTATGAACTTACTCCCGCACCGTGGAATGAG
AAACACACCTTGCTGCGGCTGGATATTGCCGCCAACGATATTGCGCGTAGCAAATTACCGCCTACGAATTTAGTTTTTCT
TATTGATACATCCGGTTCCATGAACTCAGATGAGCGTCTGCCATTAATTAAATCCTCACTTAAATTGTTAGTTAACGAAT
TACGCGACCAGGATCGTATCTCAATTGTTACTTATGCAGGTTCTGCCAGGTTATTGTTGTCCTCAACATCAGGAGCGGAA
AAAAACACCATTCTCAATGCCATCGCAAACCTTCAGGCAGGTGGTGGTACTAATGGGGGCGCCGGAGTGGCGATGGCTTA
TGAGCAGGCACAGGCGGGGTATATAAAAGGGGGCGTCAATCGCATTTTACTGGCAACAGATGGCGACTTTAATATTGGAG
ATGATCCCTCGTCAGTTGAGGATTTAGTAAAAAAACAACGTGAAAGTGGTATTACACTATCCACCCTTGGTGTAGGAGAT
AATAATTACAACGAAGCGATGATGGTGAAAATAGCCGATACCGGAAACGGTAACTACAGCTACCTTGATTCATTATCGGA
AGCACAAAAAGTACTCAGCAATGAGATGAATCAGACCCTGGTCACTGTGGCAAAGGACGTTAAAGCACAGATCGAATTTA
ACCCACAACAAGTTATTGAATATCGCCAGATTGGCTATGAGAAACGACAGCTACGGGCGGATGAATTTAATAACGATGCC
GTAGATGCTGGCGATATAGGTGCGGGCAAACATGTTACTGTCTTATTTGAGTTAACCCTTGCCGGGCAACAAGCTTCAGT
TGATAAATTACGTTATGGCAAATCTCCTGCATCAACACAGACCAGTAACAGTAATGAATTAATGTGGGTGAAATTGCGGT
ATAAAGCACCACAAGGTGAAAGCAGTCGTCTGGTTGAGATGCCAATTATATCCAGTGCAGTGACTCGCAACTTTTCCAGG
GCTTCGCCAGATATGCATTTCTTATCGGCAGTAGCGGCCTATGGGCAAAAACTGCGCGGCTCGGAATACCTGAACAAAAC
CTCGTGGCAGCAGATTCAAAGCTGGGCGCAGGAAGGTAAAGGTGCAGATCAATACGGTTACCGTGCTGAATTTATACAAC
TGGTAGGATTAGCTGAAAGCTTGTCACGTTAA

Upstream 100 bases:

>100_bases
ATTGGTGGTTATTTTCATGATTTATCGCTTTCCAGGAATAATCCGCTAATTATTTTTATGAATATATTTTGATTGGCTAA
TTTTTCTTAAGAGGCTATGT

Downstream 100 bases:

>100_bases
TATTTATGATTATTCGCCGTCGATATGTTTATCGACGGCGATATTTTTTAGTGGGCTTACTGGTGGCTGACCAACAGCCC
CGCAGTATTTTGTGCGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MLPLWFCQIKGIYMRVNKIYIISICGVLLSGCSSSVSSPQAEERWHYVTMSAYAPSPVQQGQLQQNTARYTHHEANPIKQ
TAQEPLATFSFDVDTGSYANVRRFLKTGSLPGADVVRVEELVNYFPLTEATKKNIPGCKGCEENSPFSINYELTPAPWNE
KHTLLRLDIAANDIARSKLPPTNLVFLIDTSGSMNSDERLPLIKSSLKLLVNELRDQDRISIVTYAGSARLLLSSTSGAE
KNTILNAIANLQAGGGTNGGAGVAMAYEQAQAGYIKGGVNRILLATDGDFNIGDDPSSVEDLVKKQRESGITLSTLGVGD
NNYNEAMMVKIADTGNGNYSYLDSLSEAQKVLSNEMNQTLVTVAKDVKAQIEFNPQQVIEYRQIGYEKRQLRADEFNNDA
VDAGDIGAGKHVTVLFELTLAGQQASVDKLRYGKSPASTQTSNSNELMWVKLRYKAPQGESSRLVEMPIISSAVTRNFSR
ASPDMHFLSAVAAYGQKLRGSEYLNKTSWQQIQSWAQEGKGADQYGYRAEFIQLVGLAESLSR

Sequences:

>Translated_543_residues
MLPLWFCQIKGIYMRVNKIYIISICGVLLSGCSSSVSSPQAEERWHYVTMSAYAPSPVQQGQLQQNTARYTHHEANPIKQ
TAQEPLATFSFDVDTGSYANVRRFLKTGSLPGADVVRVEELVNYFPLTEATKKNIPGCKGCEENSPFSINYELTPAPWNE
KHTLLRLDIAANDIARSKLPPTNLVFLIDTSGSMNSDERLPLIKSSLKLLVNELRDQDRISIVTYAGSARLLLSSTSGAE
KNTILNAIANLQAGGGTNGGAGVAMAYEQAQAGYIKGGVNRILLATDGDFNIGDDPSSVEDLVKKQRESGITLSTLGVGD
NNYNEAMMVKIADTGNGNYSYLDSLSEAQKVLSNEMNQTLVTVAKDVKAQIEFNPQQVIEYRQIGYEKRQLRADEFNNDA
VDAGDIGAGKHVTVLFELTLAGQQASVDKLRYGKSPASTQTSNSNELMWVKLRYKAPQGESSRLVEMPIISSAVTRNFSR
ASPDMHFLSAVAAYGQKLRGSEYLNKTSWQQIQSWAQEGKGADQYGYRAEFIQLVGLAESLSR
>Mature_543_residues
MLPLWFCQIKGIYMRVNKIYIISICGVLLSGCSSSVSSPQAEERWHYVTMSAYAPSPVQQGQLQQNTARYTHHEANPIKQ
TAQEPLATFSFDVDTGSYANVRRFLKTGSLPGADVVRVEELVNYFPLTEATKKNIPGCKGCEENSPFSINYELTPAPWNE
KHTLLRLDIAANDIARSKLPPTNLVFLIDTSGSMNSDERLPLIKSSLKLLVNELRDQDRISIVTYAGSARLLLSSTSGAE
KNTILNAIANLQAGGGTNGGAGVAMAYEQAQAGYIKGGVNRILLATDGDFNIGDDPSSVEDLVKKQRESGITLSTLGVGD
NNYNEAMMVKIADTGNGNYSYLDSLSEAQKVLSNEMNQTLVTVAKDVKAQIEFNPQQVIEYRQIGYEKRQLRADEFNNDA
VDAGDIGAGKHVTVLFELTLAGQQASVDKLRYGKSPASTQTSNSNELMWVKLRYKAPQGESSRLVEMPIISSAVTRNFSR
ASPDMHFLSAVAAYGQKLRGSEYLNKTSWQQIQSWAQEGKGADQYGYRAEFIQLVGLAESLSR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0103 [H]

Homologues:

Organism=Escherichia coli, GI1788606, Length=479, Percent_Identity=65.3444676409186, Blast_Score=634, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021908
- InterPro:   IPR022156
- InterPro:   IPR002035 [H]

Pfam domain/function: PF12034 DUF3520; PF00092 VWA; PF12450 vWF_A [H]

EC number: NA

Molecular weight: Translated: 59549; Mature: 59549

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLWFCQIKGIYMRVNKIYIISICGVLLSGCSSSVSSPQAEERWHYVTMSAYAPSPVQQ
CCCEEEEEECCEEEEECCEEHHHHHHHHHHCCCCCCCCCCHHHCEEEEEEECCCCCCHHC
GQLQQNTARYTHHEANPIKQTAQEPLATFSFDVDTGSYANVRRFLKTGSLPGADVVRVEE
CCHHHHHHHHCCCCCCHHHHHHHCCHHEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHH
LVNYFPLTEATKKNIPGCKGCEENSPFSINYELTPAPWNEKHTLLRLDIAANDIARSKLP
HHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHCCCC
PTNLVFLIDTSGSMNSDERLPLIKSSLKLLVNELRDQDRISIVTYAGSARLLLSSTSGAE
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCH
KNTILNAIANLQAGGGTNGGAGVAMAYEQAQAGYIKGGVNRILLATDGDFNIGDDPSSVE
HHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCEEECCCCEEEEEECCCCCCCCCCHHHH
DLVKKQRESGITLSTLGVGDNNYNEAMMVKIADTGNGNYSYLDSLSEAQKVLSNEMNQTL
HHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VTVAKDVKAQIEFNPQQVIEYRQIGYEKRQLRADEFNNDAVDAGDIGAGKHVTVLFELTL
HHHHHHHHEEEECCHHHHHHHHHCCCHHHHHCHHCCCCCCCCCCCCCCCCEEEEEEEEEE
AGQQASVDKLRYGKSPASTQTSNSNELMWVKLRYKAPQGESSRLVEMPIISSAVTRNFSR
CCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCHHHHHHHCCHHH
ASPDMHFLSAVAAYGQKLRGSEYLNKTSWQQIQSWAQEGKGADQYGYRAEFIQLVGLAES
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LSR
HCC
>Mature Secondary Structure
MLPLWFCQIKGIYMRVNKIYIISICGVLLSGCSSSVSSPQAEERWHYVTMSAYAPSPVQQ
CCCEEEEEECCEEEEECCEEHHHHHHHHHHCCCCCCCCCCHHHCEEEEEEECCCCCCHHC
GQLQQNTARYTHHEANPIKQTAQEPLATFSFDVDTGSYANVRRFLKTGSLPGADVVRVEE
CCHHHHHHHHCCCCCCHHHHHHHCCHHEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHH
LVNYFPLTEATKKNIPGCKGCEENSPFSINYELTPAPWNEKHTLLRLDIAANDIARSKLP
HHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHCCCC
PTNLVFLIDTSGSMNSDERLPLIKSSLKLLVNELRDQDRISIVTYAGSARLLLSSTSGAE
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCH
KNTILNAIANLQAGGGTNGGAGVAMAYEQAQAGYIKGGVNRILLATDGDFNIGDDPSSVE
HHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCEEECCCCEEEEEECCCCCCCCCCHHHH
DLVKKQRESGITLSTLGVGDNNYNEAMMVKIADTGNGNYSYLDSLSEAQKVLSNEMNQTL
HHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VTVAKDVKAQIEFNPQQVIEYRQIGYEKRQLRADEFNNDAVDAGDIGAGKHVTVLFELTL
HHHHHHHHEEEECCHHHHHHHHHCCCHHHHHCHHCCCCCCCCCCCCCCCCEEEEEEEEEE
AGQQASVDKLRYGKSPASTQTSNSNELMWVKLRYKAPQGESSRLVEMPIISSAVTRNFSR
CCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCHHHHHHHCCHHH
ASPDMHFLSAVAAYGQKLRGSEYLNKTSWQQIQSWAQEGKGADQYGYRAEFIQLVGLAES
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LSR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]