Click here to switch to the map view.

The map label for this gene is yfcI [H]

Identifier: 218548240

GI number: 218548240

Start: 874454

End: 875356

Strand: Direct

Name: yfcI [H]

Synonym: EFER_0858

Alternate gene names: 218548240

Gene position: 874454-875356 (Clockwise)

Preceding gene: 218548239

Following gene: 218548244

Centisome position: 19.06

GC content: 46.29

Gene sequence:

>903_bases
ATGACAATATCGACAACTTCCACGCCGCATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTT
TATTGATATTCATCTTCCCGCGCCGCTGCGTAAACTGTGTGATTTAACGACGCTTAAACTGGAACCAAACAGTTTTATTG
ATGAAGACCTGCGGCAATATTATTCCGACCTCTTGTGGTCTGTGAAAACGCAGGAGGGAGCGGGTTATATTTATGTGGTG
ATAGAGCACCAAAGTAAGCCGGAGGAATTAATGGCTTTTCGCATGATGCGCTATTCCATCGCGGCGATGCAAAACCATCT
GGATGCAGGCTATAAAGAGCTTCCATTGGTGATCCCAATGCTGTTTTATCATGGTTGCAGAAGCCCTTATCCTTATTCAC
TCTGCTGGCTTGATGAGTTTGCCGAGCCTGCGATAGCCCGCAAAATATATTCATCGGCTTTTCCGCTGGTGGATATTACC
GTGGTGCCGGATGACGAGATTATGCAACATCGCAAAATGGCGCTGTTGGAGTTAATTCAGAAACATATTCGTCAGCGCGA
TCTGTTGGGATTAGTCGATCAAATTGTTTCGCTGCTAGTTACAGGGAACACTAATGACAGACAGCTAAAAGCCCTGTTTA
ATTACGTATTACAAACGGGGGATGCCCAGCGTTTCCGTGCATTTATTGGTGAGATAGCGGAACGAGCACCACAAGAAAAG
GAGAAACTGATGACCATTGCTGACAGATTACGTGAAGAAGGGCGGAATGATGGATTAATTCTGGGCAAACGCGAAGAAGC
CCTGCGCATTGCTCAGGAAATGCTGGAGAGAGGTTTAGACAGAGAGTTAGTTCTGATGGTGACCCGACTTTCGCCAGATG
ATCTTATCGCGCAAAGCCACTAA

Upstream 100 bases:

>100_bases
CTTCTGAATTCGCTGTCCAAAGATAAAAACTGCCTGCTGCATAGGGTGTTAATCGTGGTTATTGTCGCGTCATCTTAAAT
TTGAGGGGTGACGGAACGCC

Downstream 100 bases:

>100_bases
TCCTGTAACACCAGGAGTTAACTGGCGGATGTTTGCAGTAAACCACATCAGCGAACGACATCCGCCAGCGCCTCTTCTAA
ATCGTACCAGCGAAACGCAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQYYSDLLWSVKTQEGAGYIYVV
IEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDIT
VVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEK
EKLMTIADRLREEGRNDGLILGKREEALRIAQEMLERGLDRELVLMVTRLSPDDLIAQSH

Sequences:

>Translated_300_residues
MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQYYSDLLWSVKTQEGAGYIYVV
IEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDIT
VVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEK
EKLMTIADRLREEGRNDGLILGKREEALRIAQEMLERGLDRELVLMVTRLSPDDLIAQSH
>Mature_299_residues
TISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQYYSDLLWSVKTQEGAGYIYVVI
EHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDITV
VPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEKE
KLMTIADRLREEGRNDGLILGKREEALRIAQEMLERGLDRELVLMVTRLSPDDLIAQSH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=300, Percent_Identity=96, Blast_Score=590, Evalue=1e-170,
Organism=Escherichia coli, GI1789816, Length=300, Percent_Identity=64.6666666666667, Blast_Score=414, Evalue=1e-117,
Organism=Escherichia coli, GI1788577, Length=295, Percent_Identity=65.4237288135593, Blast_Score=410, Evalue=1e-116,
Organism=Escherichia coli, GI1786324, Length=285, Percent_Identity=53.3333333333333, Blast_Score=318, Evalue=3e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 34619; Mature: 34487

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQY
CCCCCCCCCHHHHHHHHHCCCCCCHHEEEEECCHHHHHHCCCCEEEECCCHHHHHHHHHH
YSDLLWSVKTQEGAGYIYVVIEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPM
HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDITVVPDDEIMQHRKMALLELIQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH
EKLMTIADRLREEGRNDGLILGKREEALRIAQEMLERGLDRELVLMVTRLSPDDLIAQSH
HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
TISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQY
CCCCCCCCHHHHHHHHHCCCCCCHHEEEEECCHHHHHHCCCCEEEECCCHHHHHHHHHH
YSDLLWSVKTQEGAGYIYVVIEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPM
HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDITVVPDDEIMQHRKMALLELIQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH
EKLMTIADRLREEGRNDGLILGKREEALRIAQEMLERGLDRELVLMVTRLSPDDLIAQSH
HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]