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The map label for this gene is ubiX [H]

Identifier: 218548234

GI number: 218548234

Start: 869366

End: 869935

Strand: Direct

Name: ubiX [H]

Synonym: EFER_0852

Alternate gene names: 218548234

Gene position: 869366-869935 (Clockwise)

Preceding gene: 218548233

Following gene: 218548235

Centisome position: 18.95

GC content: 53.33

Gene sequence:

>570_bases
ATGAAACGACTCATTGTGGGCATCAGCGGTGCCAGCGGCGCGATTTATGGCGTGCGTTTATTACAGGTTCTGCGCGATGT
CACAGATATCGAAACGCATCTGGTAATGAGCCAGGCGGCGCGCCAGACCTTATCCCTTGAAACGGATTTCTCCCTGCGTG
ATGTGCAGGCATTAGCCGATGTCACGCACGATGCGCGCGATATTGCCGCCAGCATCTCTTCCGGTTCTTTCCAGACGTTG
GGGATGGTGATTTTACCCTGTTCAATCAAAACCCTGTCCGGCATTGTGCATAGCTATACGGATGGCTTACTGACCCGTGC
AGCAGACGTGGTGCTGAAAGAGCGTCGCCCTCTGGTGCTCTGCGTACGTGAAACACCGCTGCACTTAGGCCACCTGCGTT
TAATGACTCAGGCGGCGGAAATCGGTGCGGTAATTATGCCTCCCGTTCCGGCATTTTATCATCGCCCACAATCCCTTGAT
GATGTGATAAATCAGACGGTTAACCGTGTTCTTGACCAGTTTGCGATAAATCTACCCGAAGATCTCTTTGCCCGCTGGCA
GGGCGCATAA

Upstream 100 bases:

>100_bases
GGATAATGACTTCGCTCAGGGTGCCGGTCTGGCACCCTGACTTGCAACTCCTGCCGAAATCCTGCAAAGTCTGCCTGCAA
GTCTGACAGGGCAACTATTT

Downstream 100 bases:

>100_bases
CTCCACTGTTGCCCTGTTTCAGGGCAATTTTGCAACCGCGATCAAATCCTCAACATTTTGTTCCTGCCATTCAATCTAAA
CGCTGCGATCCAACCGCCAT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLRDVQALADVTHDARDIAASISSGSFQTL
GMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFAINLPEDLFARWQGA

Sequences:

>Translated_189_residues
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLRDVQALADVTHDARDIAASISSGSFQTL
GMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFAINLPEDLFARWQGA
>Mature_189_residues
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLRDVQALADVTHDARDIAASISSGSFQTL
GMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFAINLPEDLFARWQGA

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=98.9417989417989, Blast_Score=379, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=50.8021390374332, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20694; Mature: 20694

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLRDVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVL
HHHHHHHHHHHHCCCCCHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
CVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAINLPE
EEECCCCHHHHHHHHHHHHHCCEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH
DLFARWQGA
HHHHHCCCC
>Mature Secondary Structure
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLRDVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVL
HHHHHHHHHHHHCCCCCHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
CVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAINLPE
EEECCCCHHHHHHHHHHHHHCCEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH
DLFARWQGA
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]