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The map label for this gene is perM [H]

Identifier: 218548074

GI number: 218548074

Start: 699204

End: 700265

Strand: Direct

Name: perM [H]

Synonym: EFER_0683

Alternate gene names: 218548074

Gene position: 699204-700265 (Clockwise)

Preceding gene: 218548071

Following gene: 218548088

Centisome position: 15.24

GC content: 50.94

Gene sequence:

>1062_bases
ATGCTTGAAATGTTAATGCAATGGTATCGCCGTCGTTTTAGCGACCCCGAGGCGATCGCCTTGCTGGTTATCCTGGTTGC
CGGATTCGGTATTATTTTCTTTTTCAGTGGCCTGTTGGCGCCATTGTTGGTAGCCATTGTACTGGCTTATCTGCTTGAGT
GGCCTACTGCTCGCCTGGAGTCGATCGGTTGCTCCCGAAGCCTGGCAACGTCGCTGGTGTTGATCGTCTTTGTGGGTATC
CTCCTGTTGATGGCGTTTGTCGTCCTGCCAATTGTCTGGCAGCAGGGCATCTATTTAATCCGCGATATGCCCGGAATGTT
GAACAAGCTGTCTGATTTTGCTGCCACGTTACCACGGCGTTATCCGGCACTGATGGACGCAGGCATCATCGATGCCATGG
CCGAGAATATGCGTACCCGCATGTTGTCGATAAGCGATTCGGTCGTAAAATTTTCGTTAGCGTCGCTGGTGGGCTTGCTG
ACTCTTGCTGTTTATCTGGTGTTAGTACCGTTGATGGTCTTTTTCCTGATCAAAGATAAGCAACAGATGCTGAACGCTGT
ACGTCGGGTGTTACCGCGTAACCGTGGTCTGGCCGGGCAAGTCTGGCAGGAGATGAACCAACAAATCACTAATTATATTC
GCGGTAAAGTGTTGGAGATGGTCGTCGTTGGTGTGGCGACCTGGCTGGGCTTTTTGCTGTTTGGTCTGAATTACTCGTTG
CTGTTGGCTGTACTGGTGGGATTCTCTGTTCTGATCCCTTACATTGGCGCTTTTGTGGTGACCATTCCGGTAGTGTGTGT
GGCCCTGTTTCAGTTTGGGCTTGGAACGGAGTTCTGGAGCTGCTTCGCAGTCTATCTCATTATCCAGGCACTGGACGGCA
ACCTGTTGGTTCCTGTGCTGTTTTCCGAAGCGGTGAATCTCCATCCCTTAGTGATAATTCTGTCAGTGGTGATCTTTGGC
GGTTTATGGGGATTCTGGGGCGTTTTCTTTGCCATTCCGCTGGCAACGTTAATCAAAGCTGTCATTCATGCCTGGCCTGA
CGGGCAGGTTAGCGACAGTTAA

Upstream 100 bases:

>100_bases
CAGTTTCCTGAATCAGCCATAAAAAGCGAAGTCTTTTTTGTGACATTTCGATACAATTCGGGATCGCAATCCCGCTATCA
AGATTCAGGGACAGGTTTTT

Downstream 100 bases:

>100_bases
TCTCAGGGCCCGGTGAATGTTTCATCGGGCCAATTTTCTAAAGCACTTCACGTACTGCGATCCCAAGGCGCTGCATTCGG
GACAACAACGTGGTGCGTTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTARLESIGCSRSLATSLVLIVFVGI
LLLMAFVVLPIVWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLSISDSVVKFSLASLVGLL
TLAVYLVLVPLMVFFLIKDKQQMLNAVRRVLPRNRGLAGQVWQEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVIHAWPDGQVSDS

Sequences:

>Translated_353_residues
MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTARLESIGCSRSLATSLVLIVFVGI
LLLMAFVVLPIVWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLSISDSVVKFSLASLVGLL
TLAVYLVLVPLMVFFLIKDKQQMLNAVRRVLPRNRGLAGQVWQEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVIHAWPDGQVSDS
>Mature_353_residues
MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTARLESIGCSRSLATSLVLIVFVGI
LLLMAFVVLPIVWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLSISDSVVKFSLASLVGLL
TLAVYLVLVPLMVFFLIKDKQQMLNAVRRVLPRNRGLAGQVWQEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVIHAWPDGQVSDS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=353, Percent_Identity=93.2011331444759, Blast_Score=655, Evalue=0.0,
Organism=Escherichia coli, GI87082271, Length=306, Percent_Identity=26.797385620915, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39120; Mature: 39120

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTARLE
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SIGCSRSLATSLVLIVFVGILLLMAFVVLPIVWQQGIYLIRDMPGMLNKLSDFAATLPRR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
YPALMDAGIIDAMAENMRTRMLSISDSVVKFSLASLVGLLTLAVYLVLVPLMVFFLIKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQMLNAVRRVLPRNRGLAGQVWQEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVLVGFSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQVSDS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTARLE
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SIGCSRSLATSLVLIVFVGILLLMAFVVLPIVWQQGIYLIRDMPGMLNKLSDFAATLPRR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
YPALMDAGIIDAMAENMRTRMLSISDSVVKFSLASLVGLLTLAVYLVLVPLMVFFLIKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQMLNAVRRVLPRNRGLAGQVWQEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVLVGFSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQVSDS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]