| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yeeJ [C]
Identifier: 218548054
GI number: 218548054
Start: 667397
End: 669589
Strand: Direct
Name: yeeJ [C]
Synonym: EFER_0663
Alternate gene names: 218548054
Gene position: 667397-669589 (Clockwise)
Preceding gene: 218548053
Following gene: 218548055
Centisome position: 14.54
GC content: 48.84
Gene sequence:
>2193_bases ATGTCACAGGGGATGTGCATGCTGCGATGGAAACGCTGTATTATGCTAACATTTATCTCTGGAGCTGCTTTTGCGGCTCC AGAGATAAATGTTGAGCATAAAGAATCGTTACCTGATTTAGGTAGTCAGGCCGCACAACAGGAAGAACAAACTAACAAGG GTAAATCGCTAAAAGAGCGTGGTGCCGATTACGTCATTAACTCCGCCACGCAAGGGTTTGAAAACCTGACACCCGAGGCG CTGGAGTCCCAGGCCAGAAGCTATCTGCAAAGTCAAATTACCTCTACGACACAATCTTATATTGAGGATACACTCTCCCC CTACGGTAAGGTCCGAACGAATCTTTCTCTTGGTCAGGGCGGCGATCTGGATGGCAGTTCCATCGACTATTTTGTTCCCT GGTATGATAATCAAACTACTGTTTATTTCAGCCAATTTTCCGCACAACGAAAAGAAGATCGTACGATCGGGAATATTGGG CTTGGTGTAAGACATAATTTTGAAAAATGGTTGTTGGGTGGAAATATATTTTATGATTATGATTTTACCCGAGGACATCG CCGTTTAGGTTTAGGCGCCGAAGCGTGGACTGATTATTTAAAATTCTCTGGCAACTATTATCACCCGCTTTCTGATTGGA AAGACTCCGAAGATTTTGATTTTTATGAGGAGCGTCCTGCGCGCGGCTGGGATATTCGCGCCGACGCCTGGCTACCCGCT TACCCGCAGCTTGGCGGTAAAATCGTTTTCGAACAGTATTACGGTGATGAAGTCGCGCTTTTTGGAACTGATAATCTGGA GAAAGATCCCTTCGCCGTCACGCTGGGTGTGAAATACCAGCCCGTACCGCTCATTGCCGTCGGTACAGATTTCAAAGCTG GCACTGGCGATAATACCGATCTTTCTGTTAACGCAACGCTGAACTACCAGTTTGGCGTCCCGCTCAAAGACCAGCTTGAT CCTGACAAAGTGAGCGCGGCTCACTCGCTCATGGGCAGCCGTCACGACTTTGTTGAACGTAACAACTTTATTGTTCTGGA ATACAAAGAGAAAGATCCCCTCGATGTCACTTTGTGGCTGAAAGCTGATGCGACGAATGAACATCCCGAGTGCGTGATTA AAGATACGCCAGAAGCAGCCATCGGGCTGGAAAAATGTAAGTGGACCATTAACGCGCTCATTAATCATCACTACAAAATC GTTGCTGCCTCCTGGCAGGCGAAAAACAATGCTGCACGTACGCTGGTGATGCCGGTTATCAAAGAAAATACGCTTACTGA AGGGACCAACAACCACTGGAATCTGGTGCTGCCTGCCTGGCAGTACAGCTCTGATAAAGCCGACCAGGAAAAACTCAATA CCTGGCGGGTACGTCTGGCGCTGGAAGATGAAAAGGGCAATCGGCAGAACTCCGGCGTGGTGGAAATTACCGTTCAGCAG GACCGTAAAATTGAGCTCATTGTTAACAACATCGCCAATGTACCGGATGAGAACAATCACAGCCACGAAGCCAGCGCGCA AGCGGATGGTGTAGATGGTGTCGTCATGGATCTCGACGTTACCGATAGCTTTGGCGACAACACTGACCGTAACGGTAATG TCTTGCCGCAGGATAATCTCAGCCCGCAGCTGTTTGATGCCAACGATAAAAAAGTGACGCTGACGAATAAACCCTGCACC ACCGAGGTGCCGTGCGTTTTTATCGCCAAACAAGATAAAGAAAAGGGGACCGTTACGCTCTCCAGTACGTTGCCCGGCAC TTTCCGCTGGAAGGCGAAAGCCGCACCTTACGATGACAGTAACTATGTTGACGTAACGTTCCTGGGTTCTGACATCGGCG GGCTGAATGCTTTTATCTACCGCGTTGGTGCGGCTAAGCCCGTCAATCTTATCGGTAACAAAGAACCGTTGCCCCTCAAT AGCCGCTATCGCTTTGTGCTGTGGCGCGACGCTAACAAAGACGGCGTGTTTCAGCTTTCTGAGAAGCTCACTGACGACGA GATGAAACAGTATGACTACCAGTGGGAATTCACGGGGAATAGCGTAAATGGCAATACCGGCGCGCAAACCAATACCGCTA ATGTCGATATAGCGATCCCGGTAACCAACAAGGAAGCGGCAGCAAAGTTTAATGCTCAGGTAACCGATGGTGTGCAGGGA TACGGTTTGCAGGTCAATTACAGCAAGAAATAG
Upstream 100 bases:
>100_bases AAATCACTGTGTTATAAATTTAAGATTATATTTAGTTTTCCTGGCGTGCCTTTCTGAACAATCTGGAATAGAATATTAAA GCTTATTTTAAGCATTATTA
Downstream 100 bases:
>100_bases GGTCGGCGCCATGGCTGATCGGGCCACCGCTGAATATTAATCAAGGAGAGTGTTTATGAAACCTCATATGAAACGTGGCC TGACAAAAGTCGCGCTGGCA
Product: intimin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MSQGMCMLRWKRCIMLTFISGAAFAAPEINVEHKESLPDLGSQAAQQEEQTNKGKSLKERGADYVINSATQGFENLTPEA LESQARSYLQSQITSTTQSYIEDTLSPYGKVRTNLSLGQGGDLDGSSIDYFVPWYDNQTTVYFSQFSAQRKEDRTIGNIG LGVRHNFEKWLLGGNIFYDYDFTRGHRRLGLGAEAWTDYLKFSGNYYHPLSDWKDSEDFDFYEERPARGWDIRADAWLPA YPQLGGKIVFEQYYGDEVALFGTDNLEKDPFAVTLGVKYQPVPLIAVGTDFKAGTGDNTDLSVNATLNYQFGVPLKDQLD PDKVSAAHSLMGSRHDFVERNNFIVLEYKEKDPLDVTLWLKADATNEHPECVIKDTPEAAIGLEKCKWTINALINHHYKI VAASWQAKNNAARTLVMPVIKENTLTEGTNNHWNLVLPAWQYSSDKADQEKLNTWRVRLALEDEKGNRQNSGVVEITVQQ DRKIELIVNNIANVPDENNHSHEASAQADGVDGVVMDLDVTDSFGDNTDRNGNVLPQDNLSPQLFDANDKKVTLTNKPCT TEVPCVFIAKQDKEKGTVTLSSTLPGTFRWKAKAAPYDDSNYVDVTFLGSDIGGLNAFIYRVGAAKPVNLIGNKEPLPLN SRYRFVLWRDANKDGVFQLSEKLTDDEMKQYDYQWEFTGNSVNGNTGAQTNTANVDIAIPVTNKEAAAKFNAQVTDGVQG YGLQVNYSKK
Sequences:
>Translated_730_residues MSQGMCMLRWKRCIMLTFISGAAFAAPEINVEHKESLPDLGSQAAQQEEQTNKGKSLKERGADYVINSATQGFENLTPEA LESQARSYLQSQITSTTQSYIEDTLSPYGKVRTNLSLGQGGDLDGSSIDYFVPWYDNQTTVYFSQFSAQRKEDRTIGNIG LGVRHNFEKWLLGGNIFYDYDFTRGHRRLGLGAEAWTDYLKFSGNYYHPLSDWKDSEDFDFYEERPARGWDIRADAWLPA YPQLGGKIVFEQYYGDEVALFGTDNLEKDPFAVTLGVKYQPVPLIAVGTDFKAGTGDNTDLSVNATLNYQFGVPLKDQLD PDKVSAAHSLMGSRHDFVERNNFIVLEYKEKDPLDVTLWLKADATNEHPECVIKDTPEAAIGLEKCKWTINALINHHYKI VAASWQAKNNAARTLVMPVIKENTLTEGTNNHWNLVLPAWQYSSDKADQEKLNTWRVRLALEDEKGNRQNSGVVEITVQQ DRKIELIVNNIANVPDENNHSHEASAQADGVDGVVMDLDVTDSFGDNTDRNGNVLPQDNLSPQLFDANDKKVTLTNKPCT TEVPCVFIAKQDKEKGTVTLSSTLPGTFRWKAKAAPYDDSNYVDVTFLGSDIGGLNAFIYRVGAAKPVNLIGNKEPLPLN SRYRFVLWRDANKDGVFQLSEKLTDDEMKQYDYQWEFTGNSVNGNTGAQTNTANVDIAIPVTNKEAAAKFNAQVTDGVQG YGLQVNYSKK >Mature_729_residues SQGMCMLRWKRCIMLTFISGAAFAAPEINVEHKESLPDLGSQAAQQEEQTNKGKSLKERGADYVINSATQGFENLTPEAL ESQARSYLQSQITSTTQSYIEDTLSPYGKVRTNLSLGQGGDLDGSSIDYFVPWYDNQTTVYFSQFSAQRKEDRTIGNIGL GVRHNFEKWLLGGNIFYDYDFTRGHRRLGLGAEAWTDYLKFSGNYYHPLSDWKDSEDFDFYEERPARGWDIRADAWLPAY PQLGGKIVFEQYYGDEVALFGTDNLEKDPFAVTLGVKYQPVPLIAVGTDFKAGTGDNTDLSVNATLNYQFGVPLKDQLDP DKVSAAHSLMGSRHDFVERNNFIVLEYKEKDPLDVTLWLKADATNEHPECVIKDTPEAAIGLEKCKWTINALINHHYKIV AASWQAKNNAARTLVMPVIKENTLTEGTNNHWNLVLPAWQYSSDKADQEKLNTWRVRLALEDEKGNRQNSGVVEITVQQD RKIELIVNNIANVPDENNHSHEASAQADGVDGVVMDLDVTDSFGDNTDRNGNVLPQDNLSPQLFDANDKKVTLTNKPCTT EVPCVFIAKQDKEKGTVTLSSTLPGTFRWKAKAAPYDDSNYVDVTFLGSDIGGLNAFIYRVGAAKPVNLIGNKEPLPLNS RYRFVLWRDANKDGVFQLSEKLTDDEMKQYDYQWEFTGNSVNGNTGAQTNTANVDIAIPVTNKEAAAKFNAQVTDGVQGY GLQVNYSKK
Specific function: Invasin is a protein that allows enteric bacteria to penetrate cultured mammalian cells. The entry of invasin in the cell is mediated by binding several beta-1 chain integrins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell surface [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 Big-1 (bacterial Ig-like domain 1) domains [H]
Homologues:
Organism=Escherichia coli, GI145693153, Length=407, Percent_Identity=35.3808353808354, Blast_Score=258, Evalue=1e-69, Organism=Escherichia coli, GI145693120, Length=444, Percent_Identity=31.3063063063063, Blast_Score=204, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003344 - InterPro: IPR016186 - InterPro: IPR016187 - InterPro: IPR003535 - InterPro: IPR013117 - InterPro: IPR008964 - InterPro: IPR015217 [H]
Pfam domain/function: PF02369 Big_1; PF07979 Intimin_C; PF09134 Invasin_D3 [H]
EC number: NA
Molecular weight: Translated: 81649; Mature: 81518
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGMCMLRWKRCIMLTFISGAAFAAPEINVEHKESLPDLGSQAAQQEEQTNKGKSLKER CCCCEEHHHHHHEEEEEEECCCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHC GADYVINSATQGFENLTPEALESQARSYLQSQITSTTQSYIEDTLSPYGKVRTNLSLGQG CCCEEEECHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCC GDLDGSSIDYFVPWYDNQTTVYFSQFSAQRKEDRTIGNIGLGVRHNFEKWLLGGNIFYDY CCCCCCCEEEEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCEECCCHHEEECCEEEEEE DFTRGHRRLGLGAEAWTDYLKFSGNYYHPLSDWKDSEDFDFYEERPARGWDIRADAWLPA CCCCCCCEECCCHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCC YPQLGGKIVFEQYYGDEVALFGTDNLEKDPFAVTLGVKYQPVPLIAVGTDFKAGTGDNTD CCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECEECCEEEEEECCCCCCCCCCCCE LSVNATLNYQFGVPLKDQLDPDKVSAAHSLMGSRHDFVERNNFIVLEYKEKDPLDVTLWL EEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCEEEEEE KADATNEHPECVIKDTPEAAIGLEKCKWTINALINHHYKIVAASWQAKNNAARTLVMPVI EECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEE KENTLTEGTNNHWNLVLPAWQYSSDKADQEKLNTWRVRLALEDEKGNRQNSGVVEITVQQ CCCCCCCCCCCCEEEEEEEEECCCCCCCHHHCCEEEEEEEEECCCCCCCCCCEEEEEECC DRKIELIVNNIANVPDENNHSHEASAQADGVDGVVMDLDVTDSFGDNTDRNGNVLPQDNL CCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC SPQLFDANDKKVTLTNKPCTTEVPCVFIAKQDKEKGTVTLSSTLPGTFRWKAKAAPYDDS CCCEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCC NYVDVTFLGSDIGGLNAFIYRVGAAKPVNLIGNKEPLPLNSRYRFVLWRDANKDGVFQLS CEEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCEEHHH EKLTDDEMKQYDYQWEFTGNSVNGNTGAQTNTANVDIAIPVTNKEAAAKFNAQVTDGVQG HHCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHHEECCEECCCCCC YGLQVNYSKK CEEEEEECCC >Mature Secondary Structure SQGMCMLRWKRCIMLTFISGAAFAAPEINVEHKESLPDLGSQAAQQEEQTNKGKSLKER CCCEEHHHHHHEEEEEEECCCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHC GADYVINSATQGFENLTPEALESQARSYLQSQITSTTQSYIEDTLSPYGKVRTNLSLGQG CCCEEEECHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCC GDLDGSSIDYFVPWYDNQTTVYFSQFSAQRKEDRTIGNIGLGVRHNFEKWLLGGNIFYDY CCCCCCCEEEEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCEECCCHHEEECCEEEEEE DFTRGHRRLGLGAEAWTDYLKFSGNYYHPLSDWKDSEDFDFYEERPARGWDIRADAWLPA CCCCCCCEECCCHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCC YPQLGGKIVFEQYYGDEVALFGTDNLEKDPFAVTLGVKYQPVPLIAVGTDFKAGTGDNTD CCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEECEECCEEEEEECCCCCCCCCCCCE LSVNATLNYQFGVPLKDQLDPDKVSAAHSLMGSRHDFVERNNFIVLEYKEKDPLDVTLWL EEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCEEEEEE KADATNEHPECVIKDTPEAAIGLEKCKWTINALINHHYKIVAASWQAKNNAARTLVMPVI EECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEE KENTLTEGTNNHWNLVLPAWQYSSDKADQEKLNTWRVRLALEDEKGNRQNSGVVEITVQQ CCCCCCCCCCCCEEEEEEEEECCCCCCCHHHCCEEEEEEEEECCCCCCCCCCEEEEEECC DRKIELIVNNIANVPDENNHSHEASAQADGVDGVVMDLDVTDSFGDNTDRNGNVLPQDNL CCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC SPQLFDANDKKVTLTNKPCTTEVPCVFIAKQDKEKGTVTLSSTLPGTFRWKAKAAPYDDS CCCEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCC NYVDVTFLGSDIGGLNAFIYRVGAAKPVNLIGNKEPLPLNSRYRFVLWRDANKDGVFQLS CEEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCEEHHH EKLTDDEMKQYDYQWEFTGNSVNGNTGAQTNTANVDIAIPVTNKEAAAKFNAQVTDGVQG HHCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHHEECCEECCCCCC YGLQVNYSKK CEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3304658; 1693333; 10514372 [H]