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The map label for this gene is yfdK [H]

Identifier: 218548019

GI number: 218548019

Start: 625989

End: 626549

Strand: Direct

Name: yfdK [H]

Synonym: EFER_0625

Alternate gene names: 218548019

Gene position: 625989-626549 (Clockwise)

Preceding gene: 218548018

Following gene: 218548021

Centisome position: 13.64

GC content: 44.21

Gene sequence:

>561_bases
ATGGGTAACGGTAGGTTTATCATGATGGAAATGAGAAATTTTGTTATTTCTGAGCCTGTTTCAGATGAAGAAAAGCTACT
GGCAGAACTCGGTGCCATTATTCTGCGTGATGAAGAAGGCCGGGAGTGGTACACCTCTCAGCAGTTATTTAAGGACGATA
CATTCAAGATAATGTATGACAGTGAAGGTATTGTGAAATCAATAACCAGAGATGTTTCCACGCTGTTTCCTGTATCGTGC
AGTGTGGCAGAGGTTGCCAGTATTCCTGAAGGTATTGATATTTATGGCGGGTGGGTTTATTCGGACGGTAAGGTATCTGC
AAGACAGTATACCCGGAGTGAGCTTATTACCCTGGCTGAGATGGAAAAACAAACAAAAATCAGTCAGGCAAATGAATTCA
TGAACAGCCATCAGTGGGCAGGAAAGGCTGCCATTGGGCGGCTGAAAGGTGATGAGCTTGCGCAATATAACTTGTGGCTG
GATTATCTGGATGCACTGGAAAAAGTAGATACATCCGGGGTTCCGGATATTCAGTGGCCGACAAAACCAGACACAATGTA
A

Upstream 100 bases:

>100_bases
TTATTTCAATTGATACCGGATTAATGGTTCGTGGTATCACTTTTAGCGCTAACGCACAGAGCGTAAATGTACGTCCGCTT
CAGATGCTTATTGGCACACA

Downstream 100 bases:

>100_bases
GCGAAAAATAAAAACCGCAGACACGCCGTATGCAGGACGTACTGCGGATTGGCTGGTGAACTTTTGATAGTGCGAGTATT
GAATGATTTCCAGCCGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MGNGRFIMMEMRNFVISEPVSDEEKLLAELGAIILRDEEGREWYTSQQLFKDDTFKIMYDSEGIVKSITRDVSTLFPVSC
SVAEVASIPEGIDIYGGWVYSDGKVSARQYTRSELITLAEMEKQTKISQANEFMNSHQWAGKAAIGRLKGDELAQYNLWL
DYLDALEKVDTSGVPDIQWPTKPDTM

Sequences:

>Translated_186_residues
MGNGRFIMMEMRNFVISEPVSDEEKLLAELGAIILRDEEGREWYTSQQLFKDDTFKIMYDSEGIVKSITRDVSTLFPVSC
SVAEVASIPEGIDIYGGWVYSDGKVSARQYTRSELITLAEMEKQTKISQANEFMNSHQWAGKAAIGRLKGDELAQYNLWL
DYLDALEKVDTSGVPDIQWPTKPDTM
>Mature_185_residues
GNGRFIMMEMRNFVISEPVSDEEKLLAELGAIILRDEEGREWYTSQQLFKDDTFKIMYDSEGIVKSITRDVSTLFPVSCS
VAEVASIPEGIDIYGGWVYSDGKVSARQYTRSELITLAEMEKQTKISQANEFMNSHQWAGKAAIGRLKGDELAQYNLWLD
YLDALEKVDTSGVPDIQWPTKPDTM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymfS [H]

Homologues:

Organism=Escherichia coli, GI1788696, Length=73, Percent_Identity=73.972602739726, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1787401, Length=73, Percent_Identity=63.013698630137, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 21079; Mature: 20948

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNGRFIMMEMRNFVISEPVSDEEKLLAELGAIILRDEEGREWYTSQQLFKDDTFKIMYD
CCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCEEEEEC
SEGIVKSITRDVSTLFPVSCSVAEVASIPEGIDIYGGWVYSDGKVSARQYTRSELITLAE
CCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHH
MEKQTKISQANEFMNSHQWAGKAAIGRLKGDELAQYNLWLDYLDALEKVDTSGVPDIQWP
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TKPDTM
CCCCCC
>Mature Secondary Structure 
GNGRFIMMEMRNFVISEPVSDEEKLLAELGAIILRDEEGREWYTSQQLFKDDTFKIMYD
CCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCEEEEEC
SEGIVKSITRDVSTLFPVSCSVAEVASIPEGIDIYGGWVYSDGKVSARQYTRSELITLAE
CCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHH
MEKQTKISQANEFMNSHQWAGKAAIGRLKGDELAQYNLWLDYLDALEKVDTSGVPDIQWP
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TKPDTM
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]