Click here to switch to the map view.

The map label for this gene is ymfQ [H]

Identifier: 218548017

GI number: 218548017

Start: 624496

End: 625080

Strand: Direct

Name: ymfQ [H]

Synonym: EFER_0623

Alternate gene names: 218548017

Gene position: 624496-625080 (Clockwise)

Preceding gene: 218548016

Following gene: 218548018

Centisome position: 13.61

GC content: 56.24

Gene sequence:

>585_bases
ATGGACGTGACAAACGATGATTACATCCGTCTGTTGTCGGCACTGCTGCCCCCCGGTCCGGCATGGTCAGCCAGCGATCC
GGCGATTGTCGGTGCGGCACCTTCATTAACCCGTGTTCATCAGCGTGCGGATGCCCTGATGCGGGAGCTGGATCCGCGCA
CCACCACCGAACTGATAAATCGCTGGGAGCGTCTGTGCGGCCTGCCGGATGAATGTATTCCGGCGGGAACGCAGACCCTT
CGCCAGCGTCAGCAACGGCTGGATGCGAAGGTTAACCTGGCGGGCGGTATCAATGAGGATTTTTACCTTGCTCAGCTTGC
TGCTCTGGGCAGACCAGACGCCACCATCACGCGATACGACAAAAGCACTTTCACCTGCTCATCGGCCTGTACTGACGCGG
TGAATGCGCCGGAATGGCGGTATTACTGGCAGGTCAATATGCCTGCTGCCACCAACACCACCTGGATGACATGTGGTGAT
CCCTGTGATTCCGCGCTGCGTATCTGGGGCGATACTGTAATCGAGTGTGTGCTTAACAAACTCTGCCCTTCACATACCTA
CGTAATTTTTAAATATCCGGAGTAA

Upstream 100 bases:

>100_bases
CGATTTCCGGTGCGAACGGGGAATACAGCCATCAGTTGCTTGCACCGGCGGACAATATCTCCATTGCAAAAAATGAACTG
GCGGTACTGGGGACGATTTC

Downstream 100 bases:

>100_bases
TCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAAAACGGTTTTACCCGTGGTAATCC
CCAGACCGGCACGCCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDVTNDDYIRLLSALLPPGPAWSASDPAIVGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTL
RQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPAATNTTWMTCGD
PCDSALRIWGDTVIECVLNKLCPSHTYVIFKYPE

Sequences:

>Translated_194_residues
MDVTNDDYIRLLSALLPPGPAWSASDPAIVGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTL
RQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPAATNTTWMTCGD
PCDSALRIWGDTVIECVLNKLCPSHTYVIFKYPE
>Mature_194_residues
MDVTNDDYIRLLSALLPPGPAWSASDPAIVGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTL
RQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPAATNTTWMTCGD
PCDSALRIWGDTVIECVLNKLCPSHTYVIFKYPE

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 and H.influenzae HI_1521 [H]

Homologues:

Organism=Escherichia coli, GI1787399, Length=194, Percent_Identity=97.4226804123711, Blast_Score=395, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 21642; Mature: 21642

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTNDDYIRLLSALLPPGPAWSASDPAIVGAAPSLTRVHQRADALMRELDPRTTTELIN
CCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH
RWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYD
HHHHHCCCCHHHCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECC
KSTFTCSSACTDAVNAPEWRYYWQVNMPAATNTTWMTCGDPCDSALRIWGDTVIECVLNK
CCCEEEHHHHHHCCCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
LCPSHTYVIFKYPE
HCCCCEEEEEECCC
>Mature Secondary Structure
MDVTNDDYIRLLSALLPPGPAWSASDPAIVGAAPSLTRVHQRADALMRELDPRTTTELIN
CCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH
RWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYD
HHHHHCCCCHHHCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECC
KSTFTCSSACTDAVNAPEWRYYWQVNMPAATNTTWMTCGDPCDSALRIWGDTVIECVLNK
CCCEEEHHHHHHCCCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
LCPSHTYVIFKYPE
HCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]