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The map label for this gene is ymfR

Identifier: 218547997

GI number: 218547997

Start: 609848

End: 610030

Strand: Direct

Name: ymfR

Synonym: EFER_0603

Alternate gene names: 218547997

Gene position: 609848-610030 (Clockwise)

Preceding gene: 218547996

Following gene: 218547998

Centisome position: 13.29

GC content: 60.66

Gene sequence:

>183_bases
ATGATCATGCTGATTCTCGCGCCTCTGGTGGGCGTGCTGGGGGCGCTTTTGCTGGCGTATGGTGCCTGGCTGATTTATCC
CCCGGCGGGGTTTGTTGTTGCCGGGGCGTTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGT
CGTCTGTCGGCGGAGGTAAATAG

Upstream 100 bases:

>100_bases
TGATTATGGCGGTTGGCAGAGCCATGCTGTACGAGAAAGAAGACACGCTGTCTGACCACATTGAGTCCTATGGGATCCGC
TCGCTTTAACTGAGGTAATT

Downstream 100 bases:

>100_bases
TGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCTATCGGGTTG
TCCTACGACACCTATACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK

Sequences:

>Translated_60_residues
MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK
>Mature_60_residues
MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787396, Length=60, Percent_Identity=100, Blast_Score=115, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YMFR_ECOLI (P75979)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   C64860
- RefSeq:   AP_001776.1
- RefSeq:   NP_415668.1
- STRING:   P75979
- EnsemblBacteria:   EBESCT00000004928
- EnsemblBacteria:   EBESCT00000016944
- GeneID:   945700
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1136
- KEGG:   eco:b1150
- EchoBASE:   EB4082
- EcoGene:   EG14336
- GeneTree:   EBGT00050000012061
- HOGENOM:   HBG086514
- OMA:   YLDRTRQ
- ProtClustDB:   CLSK891728
- BioCyc:   EcoCyc:G6594-MONOMER
- Genevestigator:   P75979
- InterPro:   IPR020297
- ProDom:   PD052744

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6381; Mature: 6381

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x405b4360)-; HASH(0x28907198)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503