| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yfhB [H]
Identifier: 218547913
GI number: 218547913
Start: 513013
End: 513648
Strand: Direct
Name: yfhB [H]
Synonym: EFER_0515
Alternate gene names: 218547913
Gene position: 513013-513648 (Clockwise)
Preceding gene: 218547910
Following gene: 218547914
Centisome position: 11.18
GC content: 52.04
Gene sequence:
>636_bases TTGGCAACTCACGAGCGTCGTGTGGTGTTTTTTGACTTAGATGGAACATTGCATCAGCAGGATATGTTCGGCAGTTTTAT GCGTTATTTACTGCGTCGCCAACCGCTGAATGCATTACTTGTCCTGCCGTTGTTGCCGGTCATTGCCATCGCGTTATTGA TAAAAGGTCGTGCAGCACGATGGCCGATGAGTCTGCTTCTTTGGGGATGCACTTTTGGTCACAGTGAAGCGCGTTTACAG GCGTTGCAGGCTGATTTTGTGCACTGGTTTCGCGACAATGTTACCGCTTTTCCGCTTGTCCAGGAGCGTTTGACTACCTA CCTGTTAAGTTCCGATGCGGATATTTGGTTGATCACAGGATCTCCGCAGCCGCTGGTTGAAGCGGTTTATTTCGATACGC CCTGGCTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCGTTGTCTG GGACATGAAAAGGTCGCGCAACTGGAGCGCAAAATCGGCACGCCGCTGCGGCTGTACAGTGGCTATAGCGACAGTAATCA GGACAACCCGCTGCTTTATTTCTGCCAGCATCGTTGGCGGGTAACCCCGCGCGGTGAACTCCAGCAACTGGAATAG
Upstream 100 bases:
>100_bases CCATGATGCAGTCGATTGTTGCCGGAAAAGTGATGATCTATCTGTTAGGCTATGTAGTAGCGAAGATTAATCAGGATGTT TCAGTCCAGAGGAGTATGGT
Downstream 100 bases:
>100_bases AGTAAAGCATAGCGTCCGTGTATAATGCGCCGCGCTTTTATAACCGGAGTTTTCTTTTTGTCTGAAGTCGAATTTAGCCA CGAATACTGGATGCGTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MATHERRVVFFDLDGTLHQQDMFGSFMRYLLRRQPLNALLVLPLLPVIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQ ALQADFVHWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCL GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
Sequences:
>Translated_211_residues MATHERRVVFFDLDGTLHQQDMFGSFMRYLLRRQPLNALLVLPLLPVIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQ ALQADFVHWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCL GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE >Mature_210_residues ATHERRVVFFDLDGTLHQQDMFGSFMRYLLRRQPLNALLVLPLLPVIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQA LQADFVHWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLG HEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082129, Length=211, Percent_Identity=98.1042654028436, Blast_Score=427, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006435 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24395; Mature: 24263
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHERRVVFFDLDGTLHQQDMFGSFMRYLLRRQPLNALLVLPLLPVIAIALLIKGRAAR CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC WPMSLLLWGCTFGHSEARLQALQADFVHWFRDNVTAFPLVQERLTTYLLSSDADIWLITG CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCEEEEEC SPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYS CCCHHHHHEECCCCCCCHHHHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHHHCCCEEEEC GYSDSNQDNPLLYFCQHRWRVTPRGELQQLE CCCCCCCCCCEEEEEECCEECCCCCCCCCCC >Mature Secondary Structure ATHERRVVFFDLDGTLHQQDMFGSFMRYLLRRQPLNALLVLPLLPVIAIALLIKGRAAR CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC WPMSLLLWGCTFGHSEARLQALQADFVHWFRDNVTAFPLVQERLTTYLLSSDADIWLITG CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCEEEEEC SPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYS CCCHHHHHEECCCCCCCHHHHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHHHCCCEEEEC GYSDSNQDNPLLYFCQHRWRVTPRGELQQLE CCCCCCCCCCEEEEEECCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1602968; 9278503 [H]