Click here to switch to the map view.

The map label for this gene is yfjG

Identifier: 218547863

GI number: 218547863

Start: 460578

End: 461054

Strand: Direct

Name: yfjG

Synonym: EFER_0454

Alternate gene names: 218547863

Gene position: 460578-461054 (Clockwise)

Preceding gene: 218547858

Following gene: 218547864

Centisome position: 10.04

GC content: 47.59

Gene sequence:

>477_bases
ATGATATTATTTGTTGGATTTTTGTTGATGGAAATTGTTATGCCTCAGATTAGCCGGACCGCACTGGTACCCTACAGCGC
GGAGCAAATGTATCAGTTAGTGAATGACGTTCAGTCTTATCCTCAGTTTTTGCCGGGTTGTACCGGAAGTCGGATTCTGG
AGTCCACTCCTGGGCAGATGACCGCGGCGGTAGATGTCTCTAAGGCTGGGATCAGCAAAACGTTTACTACCCGCAACCAG
TTGACCAGTAACCAAAGTATTCTTATGAATCTGGTGGATGGGCCGTTCAAGAAGTTGATCGGTGGCTGGAAGTTTACGCC
GCTAAGTCAGGAGGCGTGTCGTATCGAGTTTCATCTCGATTTTGAGTTTACCAATAAGTTGATTGAACTCGCCTTTGGCC
GCGTGTTTAAAGAGCTGGCGGCTAATATGGTCCAGGCTTTTACGGTTCGTGCGAAAGAGGTTTACAGTGCCAGGTAA

Upstream 100 bases:

>100_bases
GAAAACACCCCATATCATTCCTGCGGGGGACAAGGCTCTATCTTAGCATGAACCCGGTGTTACCCAGTGTCGGGATAGCG
TTTTTTTTACAGCAGGATAA

Downstream 100 bases:

>100_bases
AATTGCCGTTGAGGTGGCTTACGCATTACCCGAGAAGCAATACCTGCAACGGGTAAGTTTGCAGGAGGGCGCGACGGTTG
AAGAAGCTATTCGCGCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQ
LTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR

Sequences:

>Translated_158_residues
MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQ
LTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR
>Mature_158_residues
MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQ
LTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR

Specific function: Unknown

COG id: COG2867

COG function: function code I; Oligoketide cyclase/lipid transport protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0083 family

Homologues:

Organism=Homo sapiens, GI151101386, Length=138, Percent_Identity=27.536231884058, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI1788972, Length=158, Percent_Identity=100, Blast_Score=328, Evalue=1e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFJG_ECOLI (P0AGL5)

Other databases:

- EMBL:   D12501
- EMBL:   U36840
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   T08632
- RefSeq:   AP_003199.1
- RefSeq:   NP_417109.1
- ProteinModelPortal:   P0AGL5
- SMR:   P0AGL5
- STRING:   P0AGL5
- EnsemblBacteria:   EBESCT00000003993
- EnsemblBacteria:   EBESCT00000017486
- GeneID:   945614
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2600
- KEGG:   eco:b2619
- EchoBASE:   EB2985
- EcoGene:   EG13193
- eggNOG:   COG2867
- GeneTree:   EBGT00050000010526
- HOGENOM:   HBG751297
- OMA:   DGPFKYL
- ProtClustDB:   PRK10724
- BioCyc:   EcoCyc:G7358-MONOMER
- Genevestigator:   P0AGL5
- InterPro:   IPR005031

Pfam domain/function: PF03364 Polyketide_cyc

EC number: NA

Molecular weight: Translated: 17727; Mature: 17727

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00036 BZIP_BASIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQM
CHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCE
TAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLD
EEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEEEEEC
FEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQM
CHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCE
TAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLD
EEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEEEEEC
FEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7524073; 9205837; 9278503