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The map label for this gene is yahC [H]

Identifier: 218547828

GI number: 218547828

Start: 427394

End: 427891

Strand: Reverse

Name: yahC [H]

Synonym: EFER_0416

Alternate gene names: 218547828

Gene position: 427891-427394 (Counterclockwise)

Preceding gene: 218547835

Following gene: 218547827

Centisome position: 9.32

GC content: 51.61

Gene sequence:

>498_bases
ATGAACGGACTCACTGCAACGGGTATAACCGTCGGTGTTTGTGCAGGGCTTTGGCAGTTAGTGTCTTCACATGTTGAGCT
TTCTCAGGGATGGGAATTATTAGGAACCATTGGCTTTGTCGCCTTTTGCAGTTTTTATGCCGCAGGCGGCGGTAAATCGG
GGTTTATCAAGAGCCTGGTGGTTAATTATTCCGGGATGGTGTGGGCGTTTTTCGCCGCGCTGGCTTCCGGTTGGCTGGCC
TCGGTGAGTGGGCTTTCCGTGTTCTGGGCAAGCGTGATGACTACCGTGCCTTTCTCAGCTGTAGTGGTCTGGCAAGGGCG
TTTCTGGTTACTGTCATTCATTCCCGGAGGCTTTCTCGGCATGACGCTGTTTTTTGCCAGCGGGATGAACTGGACGGTGA
CATTACTGGGTTTTCTGGCGGGTAACTGCGTGGGAATAATTTCAGAATATGGCGGACAAAAATTAAGCGAAGCGACGACT
AAACGCGACGGGTATTAA

Upstream 100 bases:

>100_bases
TTCTTTGACCCGATACCCTTTCACTCAATCAGGTTTTATTTCTCTATAGTCTGCACATGTAAGCGCAGCTTTCGTCCATG
TCTAACCAGAGGGGAACAAG

Downstream 100 bases:

>100_bases
AAGTTATTCAAAAATGATTATCTATCTTTAACCGATACCTCTACAGTCATGACTGGAGAAATTCAAATTAGATAATGGCG
GGAATGGTTTAATGAACTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNGLTATGITVGVCAGLWQLVSSHVELSQGWELLGTIGFVAFCSFYAAGGGKSGFIKSLVVNYSGMVWAFFAALASGWLA
SVSGLSVFWASVMTTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATT
KRDGY

Sequences:

>Translated_165_residues
MNGLTATGITVGVCAGLWQLVSSHVELSQGWELLGTIGFVAFCSFYAAGGGKSGFIKSLVVNYSGMVWAFFAALASGWLA
SVSGLSVFWASVMTTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATT
KRDGY
>Mature_165_residues
MNGLTATGITVGVCAGLWQLVSSHVELSQGWELLGTIGFVAFCSFYAAGGGKSGFIKSLVVNYSGMVWAFFAALASGWLA
SVSGLSVFWASVMTTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATT
KRDGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycdZ [H]

Homologues:

Organism=Escherichia coli, GI1786509, Length=165, Percent_Identity=93.9393939393939, Blast_Score=307, Evalue=2e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 17429; Mature: 17429

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLTATGITVGVCAGLWQLVSSHVELSQGWELLGTIGFVAFCSFYAAGGGKSGFIKSLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VNYSGMVWAFFAALASGWLASVSGLSVFWASVMTTVPFSAVVVWQGRFWLLSFIPGGFLG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHCCCHHHH
MTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKRDGY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
MNGLTATGITVGVCAGLWQLVSSHVELSQGWELLGTIGFVAFCSFYAAGGGKSGFIKSLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VNYSGMVWAFFAALASGWLASVSGLSVFWASVMTTVPFSAVVVWQGRFWLLSFIPGGFLG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHCCCHHHH
MTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKRDGY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]