| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is ascB [H]
Identifier: 218547776
GI number: 218547776
Start: 371656
End: 373080
Strand: Reverse
Name: ascB [H]
Synonym: EFER_0361
Alternate gene names: 218547776
Gene position: 373080-371656 (Counterclockwise)
Preceding gene: 218547777
Following gene: 218547766
Centisome position: 8.13
GC content: 52.56
Gene sequence:
>1425_bases ATGTCAGTATTTCCGCAAGGTTTTTTATGGGGCGGCGCGCTTGCCGCCAACCAATCTGAAGGCGCGTACCGTGAAGGCGG CAAAGGGCTGACCACGGTCGATATGATCCCGCACGGCGAACATCGAATGGCGGTGAAACTGGGGCTGGAAAAACGTTTTC AGTTGCGCGATGACGAGTTTTATCCCAGCCATGAGGCGACGGATTTTTATCATCGTTATAAAGAAGATATCGCCCTGATG GCAGAGATGGGATTCAAGGTTTTTCGCACCTCGATTGCCTGGAGCCGCCTCTTTCCGCAGGGCGATGAACTGACGCCCAA TCAGCAGGGCATTGCTTTTTACCGCGCGGTATTTGAAGAGTGTAAAAAGTACGGTATCGAACCGCTGGTCACGTTGTGTC ACTTCGACGTGCCGATGCATCTGGTCACTGAATATGGCTCCTGGCGTAACCGAAAGCTGGTGGAGTTTTTCAGCCGCTAC GCCCGGACCTGCTTTGAAGCATTTGATGGCCTGGTGAAATACTGGCTCACCTTCAATGAAATCAACATTATGTTGCATAG CCCGTTCTCCGGCGCAGGTCTGGTTTTTGAAGAAGGGGAAAATCAGGAGCAGGTGAAATATCAGGCTGCGCACCACCAGC TGGTTGCCAGTGCGTTAGCTACCAAAATCGCCCATGAGGTTAACCCGCAAAATCAGGTGGGCTGTATGCTGGCGGGCGGC AACTTCTACCCTTACAGCTGCAAGCCGGAAGATGTCTGGGCGGCGCTGGAGAAAGACCGGGAAAACCTGTTTTTTATCGA TGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCGACAAAGCACCGG GCGATGATGAAATCCTGAAAAATACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATG AATGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAACCCCTATCTGCAGGTTAGCGACTGGGGCTGGGG GATTGATCCACTCGGTCTGCGTATCACCATGAACATGATGTATGACCGTTATCAGAAGCCGCTGTTTCTGGTGGAAAACG GCCTGGGCGCAAAAGATGAATTTGCTGCCAATGGCGAAATTAACGACGACTATCGCATCAGCTATTTACGCGAACATATC CGCGCAATGGGCGAAGCGATTGCAGACGGTATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGC CTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTACGTAGACCGTGACGACGCAGGCAACGGCACGCTGGCGCGCA CGCGTAAGAAATCGTTCTGGTGGTATAAAAAAGTAATTGCCAGTAATGGGGAAGATTTAGAGTAA
Upstream 100 bases:
>100_bases TTGAGGATATTCCTGTTGAGGAAGCGGCTGCCCAGGCGCGAAAGCATCAGAGCGTACAACCGACCGTCGCCAAAGAAGTA AGTCTTAATTGAGGATGAAA
Downstream 100 bases:
>100_bases GTAACCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGTCGCACGAACCAGGAAAGCCCGATAAGCGCAGTGC ATCGGGCAATTTAGCATTTG
Product: cryptic 6-phospho-beta-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSVFPQGFLWGGALAANQSEGAYREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALM AEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRAVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQEQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG NFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEM NANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHI RAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGTLARTRKKSFWWYKKVIASNGEDLE
Sequences:
>Translated_474_residues MSVFPQGFLWGGALAANQSEGAYREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALM AEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRAVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQEQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG NFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEM NANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHI RAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGTLARTRKKSFWWYKKVIASNGEDLE >Mature_473_residues SVFPQGFLWGGALAANQSEGAYREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMA EMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRAVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYA RTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQEQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGN FYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEMN ANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIR AMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGTLARTRKKSFWWYKKVIASNGEDLE
Specific function: Can hydrolyze salicin, cellobiose, and probably arbutin [H]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI110681710, Length=499, Percent_Identity=30.4609218436874, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI32481206, Length=494, Percent_Identity=28.7449392712551, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI13273313, Length=487, Percent_Identity=27.7207392197125, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI24497614, Length=490, Percent_Identity=27.1428571428571, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI28376633, Length=491, Percent_Identity=24.0325865580448, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1789070, Length=474, Percent_Identity=97.8902953586498, Blast_Score=980, Evalue=0.0, Organism=Escherichia coli, GI2367270, Length=474, Percent_Identity=54.2194092827004, Blast_Score=540, Evalue=1e-155, Organism=Escherichia coli, GI2367174, Length=478, Percent_Identity=51.8828451882845, Blast_Score=507, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17552856, Length=487, Percent_Identity=29.9794661190965, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17539390, Length=495, Percent_Identity=30.5050505050505, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI21356577, Length=473, Percent_Identity=24.9471458773784, Blast_Score=122, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 53847; Mature: 53716
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFPQGFLWGGALAANQSEGAYREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEF CCCCCCCCEECCEEECCCCCCCHHCCCCCCEEEEECCCCCCEEEEEECCHHHCCCCCCCC YPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRAVFEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH CKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNE HHHCCCCHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE INIMLHSPFSGAGLVFEEGENQEQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG EEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTIDKAPGDDEILK CCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCHHHHH NTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMM HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEHHHH YDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWG HHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH CIDLVSASTGEMSKRYGFVYVDRDDAGNGTLARTRKKSFWWYKKVIASNGEDLE HHHHHCCCCCCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVFPQGFLWGGALAANQSEGAYREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEF CCCCCCCEECCEEECCCCCCCHHCCCCCCEEEEECCCCCCEEEEEECCHHHCCCCCCCC YPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRAVFEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH CKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNE HHHCCCCHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE INIMLHSPFSGAGLVFEEGENQEQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG EEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTIDKAPGDDEILK CCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCHHHHH NTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMM HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEHHHH YDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWG HHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH CIDLVSASTGEMSKRYGFVYVDRDDAGNGTLARTRKKSFWWYKKVIASNGEDLE HHHHHCCCCCCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1630307; 9278503 [H]