| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is iap [H]
Identifier: 218547730
GI number: 218547730
Start: 328260
End: 329297
Strand: Reverse
Name: iap [H]
Synonym: EFER_0313
Alternate gene names: 218547730
Gene position: 329297-328260 (Counterclockwise)
Preceding gene: 218547741
Following gene: 218547728
Centisome position: 7.18
GC content: 47.01
Gene sequence:
>1038_bases ATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATCCTCCCTGTCCAGGCTGCCACTGT AAGACCTGGAGATATTGCCAATACTCAGACGCGACATCTCGCCACTTTCTTTCCTGGACGAATGACCGGAACACCTGCGG AAATGTTATCTGCCGATTATATCAATCAGCAGTTTCAACAGATGGGTTATCGCAGCGATATTCGGACATTTAATAGCCGT TATATCTTCACCGATAAAAACAAGCGTAAAAGCTGGCATAACGTGACAGGAAGTACGGTGATTGCCGCTCATGAAGGAAA AGTGCCCCAGCAAATCATCATCATGGCGCATCTTGATACCTATGCTCCGCAAAGTGATGCAGATATTGATGCCAACCTTG GGGGATTAACATTACAAGGTGTGGATGATAATGCCGCAGGCCTTGGTGTTATGCTTGAACTGGCAGAGCGCCTGAAAGAT ATTCCGACTGAGTATGGGATTCGTTTTATTGCCACCAGTGGTGAAGAGGAAGGGAAATTAGGTGCTGAGAATTTACTCAA GCGCATGAGCGATACTGAAAAGAAAAATACCCTGCTGGTGATTAATCTCGATAATTTGATCGTGGGCGATAAGCTTTATT TTAATAGTGGCGTAAATACACCAGAAGCTGTCAGGAAATTAACCCGTGATCGAGCGCTGGCAATTGCGCGTAATCATGGG ATTGCAGCGACAACAAATCCAGGTTTGAATAAAAACTATCCGAAAGGCACCGGGTGTTGTAACGATGCAGAAGTTTTCGA CAAAGCCGGTATTGCGGTACTTTCGGTGGAGACGACCAACTGGAATCTTGGAAATAAGGATGGTTATCAGCAACGCTCAA AAACACCGGCCTTCCCGATGGGAAATAGCTGGCATGATGTAAGGCTTGATAATCAACAGCATATTGATAAGGCGCTTCCT GGAAGAATAGAACGTCGCTGCCGTGACGTTATGCGGATAATGCTACCGCTGGTGAAGGAGCTGGCAAAGGCGTCTTGA
Upstream 100 bases:
>100_bases CCGGATTTCGGGCGTTTAGGAAGATTTGAAATTGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGC ATGGTATTTAAGGACTCACT
Downstream 100 bases:
>100_bases TGGGGTTGAAAATGGGAGCTGGGAGTTCTACCGCAGGGGCGGGGAATTCTAAGTGATATCCATCATCGCATCCAGTGCGC CCGGTTTATCCCCGCTGATG
Product: alkaline phosphatase isozyme conversion aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MFSALRHRTAALALGVCFILPVQAATVRPGDIANTQTRHLATFFPGRMTGTPAEMLSADYINQQFQQMGYRSDIRTFNSR YIFTDKNKRKSWHNVTGSTVIAAHEGKVPQQIIIMAHLDTYAPQSDADIDANLGGLTLQGVDDNAAGLGVMLELAERLKD IPTEYGIRFIATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVNTPEAVRKLTRDRALAIARNHG IAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVETTNWNLGNKDGYQQRSKTPAFPMGNSWHDVRLDNQQHIDKALP GRIERRCRDVMRIMLPLVKELAKAS
Sequences:
>Translated_345_residues MFSALRHRTAALALGVCFILPVQAATVRPGDIANTQTRHLATFFPGRMTGTPAEMLSADYINQQFQQMGYRSDIRTFNSR YIFTDKNKRKSWHNVTGSTVIAAHEGKVPQQIIIMAHLDTYAPQSDADIDANLGGLTLQGVDDNAAGLGVMLELAERLKD IPTEYGIRFIATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVNTPEAVRKLTRDRALAIARNHG IAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVETTNWNLGNKDGYQQRSKTPAFPMGNSWHDVRLDNQQHIDKALP GRIERRCRDVMRIMLPLVKELAKAS >Mature_345_residues MFSALRHRTAALALGVCFILPVQAATVRPGDIANTQTRHLATFFPGRMTGTPAEMLSADYINQQFQQMGYRSDIRTFNSR YIFTDKNKRKSWHNVTGSTVIAAHEGKVPQQIIIMAHLDTYAPQSDADIDANLGGLTLQGVDDNAAGLGVMLELAERLKD IPTEYGIRFIATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVNTPEAVRKLTRDRALAIARNHG IAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVETTNWNLGNKDGYQQRSKTPAFPMGNSWHDVRLDNQQHIDKALP GRIERRCRDVMRIMLPLVKELAKAS
Specific function: This protein, presumably an aminopeptidase, mediates the conversion of E.coli alkaline phosphatase isozyme 1, to isozymes 2 and 3 by removing, one by one, the two amino-terminal arginine residues [H]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28C subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789111, Length=345, Percent_Identity=91.8840579710145, Blast_Score=671, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007484 [H]
Pfam domain/function: PF04389 Peptidase_M28 [H]
EC number: 3.4.11.- [C]
Molecular weight: Translated: 38083; Mature: 38083
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSALRHRTAALALGVCFILPVQAATVRPGDIANTQTRHLATFFPGRMTGTPAEMLSADY CCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHH INQQFQQMGYRSDIRTFNSRYIFTDKNKRKSWHNVTGSTVIAAHEGKVPQQIIIMAHLDT HHHHHHHCCCHHHHHHCCCEEEEECCCCCCHHCCCCCCEEEEECCCCCCCEEEEEEECCC YAPQSDADIDANLGGLTLQGVDDNAAGLGVMLELAERLKDIPTEYGIRFIATSGEEEGKL CCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCCC GAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVNTPEAVRKLTRDRALAIARNHG CHHHHHHHHHCCCCCCEEEEEEECCEEECCEEEECCCCCCHHHHHHHHHHHHEEEEECCC IAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVETTNWNLGNKDGYQQRSKTPAFPM EEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCC GNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS CCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSALRHRTAALALGVCFILPVQAATVRPGDIANTQTRHLATFFPGRMTGTPAEMLSADY CCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHH INQQFQQMGYRSDIRTFNSRYIFTDKNKRKSWHNVTGSTVIAAHEGKVPQQIIIMAHLDT HHHHHHHCCCHHHHHHCCCEEEEECCCCCCHHCCCCCCEEEEECCCCCCCEEEEEEECCC YAPQSDADIDANLGGLTLQGVDDNAAGLGVMLELAERLKDIPTEYGIRFIATSGEEEGKL CCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCCC GAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVNTPEAVRKLTRDRALAIARNHG CHHHHHHHHHCCCCCCEEEEEEECCEEECCEEEECCCCCCHHHHHHHHHHHHEEEEECCC IAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVETTNWNLGNKDGYQQRSKTPAFPM EEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCC GNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS CCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3316184; 9278503; 1316900 [H]