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The map label for this gene is ygbF [H]

Identifier: 218547726

GI number: 218547726

Start: 326600

End: 326884

Strand: Direct

Name: ygbF [H]

Synonym: EFER_0309

Alternate gene names: 218547726

Gene position: 326600-326884 (Clockwise)

Preceding gene: 218547725

Following gene: 218547731

Centisome position: 7.12

GC content: 46.32

Gene sequence:

>285_bases
ATGAGTATATTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACG
TGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAG
GCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCG
GTAGATTTGGATGGTTTAAGGTTGGTGTCTTTTTTACCTGTTTGA

Upstream 100 bases:

>100_bases
GCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCTGTTTCACTGGGAGATGC
AGGCCATCGGAGTAGCTGAA

Downstream 100 bases:

>100_bases
AAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCT
TTAAGAACAAATGTATACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSILVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTP
VDLDGLRLVSFLPV

Sequences:

>Translated_94_residues
MSILVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTP
VDLDGLRLVSFLPV
>Mature_93_residues
SILVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPV
DLDGLRLVSFLPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=94, Percent_Identity=96.8085106382979, Blast_Score=184, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 10472; Mature: 10341

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAW
CEEEEEEECCCCCCCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCCCEEEEE
ATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
ECCCCCCCEEEEECCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
SILVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAW
EEEEEEECCCCCCCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCCCEEEEE
ATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
ECCCCCCCEEEEECCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]