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The map label for this gene is lemA [H]

Identifier: 218547711

GI number: 218547711

Start: 309408

End: 310010

Strand: Reverse

Name: lemA [H]

Synonym: EFER_0292

Alternate gene names: 218547711

Gene position: 310010-309408 (Counterclockwise)

Preceding gene: 218547715

Following gene: 218547710

Centisome position: 6.76

GC content: 41.96

Gene sequence:

>603_bases
ATGCTCAGAATATTCATCGTAATTATATTTATTTTCAATTTATCAGGCTGTGGATATAACGATATTCAAACCTATGATGA
GCAGGTTAACGCTTCCTGGTCTGAGGTATTAAATCAATATCAACGTCGCGCCGATCTTATTCCTAATCTTGTCGCCAGTA
TTAAAGGTTATTCCAGCCATGAACAAGAGGTACTGGAAGCCGTAACATTGGCACGTAGTCAGGCTAATCGCGCCAGTAGT
GCTCTTCAGCAAACTCCGGGAGATGAACAAAAATTACAAACCTGGCAACAAGCTCAGGCGCAGGTGTCTCGCACTCTCGG
TCAGTTAACGATATTTAGTGAACGTTACCCTGAGCTAAAGGCCCAGGAACTCTATCAAAATTTGATGGTACAGCTCGAAG
GAAGTGAAAATCGAATTGCCGTTGCGCGAGGAAGATATATTAAAGCCATCGAACAATATAATGTCACTATCCGCAAATTC
CCCGCAGTGTTAACCGCAAAAGTCATGGATTACACACCGAAGAAAAATTATTTGCCGGATGATGTCGCCGCTGTGAGTAA
AACCCCAACAATAGATTTTAGCCAGAATACTAATGCTCATTAA

Upstream 100 bases:

>100_bases
CTGTTACAGGCAGGTTTAAGGCAAAAAGTGGATTAGATCATAAAGAATAAAATGAAGTGGCGTATTATGTTTTAAGGAAT
TAATTAAAAGGAATTTAACC

Downstream 100 bases:

>100_bases
GCGAGGAAGTCCTGTGCGAAATTTTATCTTCCTTATGGCTTTCTTTTGTTCATCTGTGTTTGCCATACAAATTCCAGTGC
CTGAATCACCCAGGTATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLRIFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSSHEQEVLEAVTLARSQANRASS
ALQQTPGDEQKLQTWQQAQAQVSRTLGQLTIFSERYPELKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKF
PAVLTAKVMDYTPKKNYLPDDVAAVSKTPTIDFSQNTNAH

Sequences:

>Translated_200_residues
MLRIFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSSHEQEVLEAVTLARSQANRASS
ALQQTPGDEQKLQTWQQAQAQVSRTLGQLTIFSERYPELKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKF
PAVLTAKVMDYTPKKNYLPDDVAAVSKTPTIDFSQNTNAH
>Mature_200_residues
MLRIFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSSHEQEVLEAVTLARSQANRASS
ALQQTPGDEQKLQTWQQAQAQVSRTLGQLTIFSERYPELKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKF
PAVLTAKVMDYTPKKNYLPDDVAAVSKTPTIDFSQNTNAH

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22708; Mature: 22708

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSSH
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EQEVLEAVTLARSQANRASSALQQTPGDEQKLQTWQQAQAQVSRTLGQLTIFSERYPELK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPD
HHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
DVAAVSKTPTIDFSQNTNAH
HHHHHCCCCCEECCCCCCCC
>Mature Secondary Structure
MLRIFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSSH
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EQEVLEAVTLARSQANRASSALQQTPGDEQKLQTWQQAQAQVSRTLGQLTIFSERYPELK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPD
HHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
DVAAVSKTPTIDFSQNTNAH
HHHHHCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]