| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is ygcG [H]
Identifier: 218547709
GI number: 218547709
Start: 307323
End: 308471
Strand: Reverse
Name: ygcG [H]
Synonym: EFER_0290
Alternate gene names: 218547709
Gene position: 308471-307323 (Counterclockwise)
Preceding gene: 218547710
Following gene: 218547708
Centisome position: 6.72
GC content: 45.34
Gene sequence:
>1149_bases ATGCGTATTTTTCTCTTACTTCTGATGCTATATGGTTTCCAGGCATTCGCTGAACAATTGCCTTCAGTAACTGACTTAAC CGGGACATTAACGACAGAAGAACAAACTGCTTTAAATCAACAATTACAGACTCTCGAGCAGCAAAACCACTTTCAGGTTG CCGTGTTGGTAACGCCGACCACTGGGGGTAAAGACATTAAACTTGCAGCCTCGCAAAGCTACGGGTTATATCACTGGAAA CCTGTTGGAGAGAAGCGGTACGGCGAAGGTATCTTAATTCTCGTCGTTTGGCCGGAAGGGCTGGCGTCAATGAAGATTGG GCATGGATTGGAAGAGATGCTGCCACCGGAACAAGCTGCGCAAATTGTTCATTACCATATGCAACCGGAATTCAAAAAAA ATAATCTCTTCTCCGGGTTAACGCAGGGAATTGAAGGCATCGCACAGTTTACCTATATAAAAGCGAATCTTAGCCCTTTG GATGCTTTAGCCAATCATCTGTTTGCTAATCCGCAACGCTCTCTGCCATGTCTTGCCTGGACACTGCTGATAATCGTTGC CATCGTTGTCCTCTGGCGATTTACCACCCATCCAGGGCCTGGCATATGGATGATATCGATGATTACCCCTATGGTCTGGT TTTTCTGCTTTCAGGATGATGTCATCATTCGGCGGGTATCGGTCGTTTGTTTTAGTTTATTTTTCGCAGCAACCTGCTGG CAGCGTCTCGCGGTAATTTTTCATATGTGTCGCGTATTTCCTATGATGCTGGCCCCAAAAAATAAAAACGCTAAAGTGAA AAAACAAAAGACGACTCAGCAGGTTTCTCAATCCGAACGAAACTCATTGTTTGTCGTGCTGCTGATAATTGTTGTGGGAT GGTGCCTGGTGTTCGCCAGTAATAAAGATATAGCATTCATCTCAACAATTATTGGGCTAATTGATCATTTTATCGGTCCA ATAACCATTGCTGGCATCGTTCTGCTGATCATTGTGGCCAAATTTACTGGCAATCTTAAACTGGGATCAGGACATAAAAG CAACAGGAAAACGGGGAATCGTAATGCTCATTCTCGCTCTTCGTCGAAAAATTCTTTCCGCGGTGGCGGCGGTTCTTCAG GAGGCGGCGGTTCATCCGACCGTTGGTGA
Upstream 100 bases:
>100_bases CTTCCTCTTCATCCTCTTTTGACAATGATAATTTCAGCGGCGGCGGCGGTTCATCTGGCGGCGGTGGCGCCTCCGGGCGC TGGTAACAAAAGGAATTGAA
Downstream 100 bases:
>100_bases TCGTTATGCGTATAATCCTTTTTCTACTCACTTTATGGTGCCTTCCTGTGCTTGCCCAGCAAATTGCTGTGCCGGAGCTG CGCCAACAGGTGACCGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRIFLLLLMLYGFQAFAEQLPSVTDLTGTLTTEEQTALNQQLQTLEQQNHFQVAVLVTPTTGGKDIKLAASQSYGLYHWK PVGEKRYGEGILILVVWPEGLASMKIGHGLEEMLPPEQAAQIVHYHMQPEFKKNNLFSGLTQGIEGIAQFTYIKANLSPL DALANHLFANPQRSLPCLAWTLLIIVAIVVLWRFTTHPGPGIWMISMITPMVWFFCFQDDVIIRRVSVVCFSLFFAATCW QRLAVIFHMCRVFPMMLAPKNKNAKVKKQKTTQQVSQSERNSLFVVLLIIVVGWCLVFASNKDIAFISTIIGLIDHFIGP ITIAGIVLLIIVAKFTGNLKLGSGHKSNRKTGNRNAHSRSSSKNSFRGGGGSSGGGGSSDRW
Sequences:
>Translated_382_residues MRIFLLLLMLYGFQAFAEQLPSVTDLTGTLTTEEQTALNQQLQTLEQQNHFQVAVLVTPTTGGKDIKLAASQSYGLYHWK PVGEKRYGEGILILVVWPEGLASMKIGHGLEEMLPPEQAAQIVHYHMQPEFKKNNLFSGLTQGIEGIAQFTYIKANLSPL DALANHLFANPQRSLPCLAWTLLIIVAIVVLWRFTTHPGPGIWMISMITPMVWFFCFQDDVIIRRVSVVCFSLFFAATCW QRLAVIFHMCRVFPMMLAPKNKNAKVKKQKTTQQVSQSERNSLFVVLLIIVVGWCLVFASNKDIAFISTIIGLIDHFIGP ITIAGIVLLIIVAKFTGNLKLGSGHKSNRKTGNRNAHSRSSSKNSFRGGGGSSGGGGSSDRW >Mature_382_residues MRIFLLLLMLYGFQAFAEQLPSVTDLTGTLTTEEQTALNQQLQTLEQQNHFQVAVLVTPTTGGKDIKLAASQSYGLYHWK PVGEKRYGEGILILVVWPEGLASMKIGHGLEEMLPPEQAAQIVHYHMQPEFKKNNLFSGLTQGIEGIAQFTYIKANLSPL DALANHLFANPQRSLPCLAWTLLIIVAIVVLWRFTTHPGPGIWMISMITPMVWFFCFQDDVIIRRVSVVCFSLFFAATCW QRLAVIFHMCRVFPMMLAPKNKNAKVKKQKTTQQVSQSERNSLFVVLLIIVVGWCLVFASNKDIAFISTIIGLIDHFIGP ITIAGIVLLIIVAKFTGNLKLGSGHKSNRKTGNRNAHSRSSSKNSFRGGGGSSGGGGSSDRW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=155, Percent_Identity=30.3225806451613, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 42377; Mature: 42377
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFLLLLMLYGFQAFAEQLPSVTDLTGTLTTEEQTALNQQLQTLEQQNHFQVAVLVTPT CHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEC TGGKDIKLAASQSYGLYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEEMLPPEQAA CCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHCCCHHHHCCHHHHH QIVHYHMQPEFKKNNLFSGLTQGIEGIAQFTYIKANLSPLDALANHLFANPQRSLPCLAW HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCHHHHH TLLIIVAIVVLWRFTTHPGPGIWMISMITPMVWFFCFQDDVIIRRVSVVCFSLFFAATCW HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QRLAVIFHMCRVFPMMLAPKNKNAKVKKQKTTQQVSQSERNSLFVVLLIIVVGWCLVFAS HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC NKDIAFISTIIGLIDHFIGPITIAGIVLLIIVAKFTGNLKLGSGHKSNRKTGNRNAHSRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC SSKNSFRGGGGSSGGGGSSDRW CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIFLLLLMLYGFQAFAEQLPSVTDLTGTLTTEEQTALNQQLQTLEQQNHFQVAVLVTPT CHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEC TGGKDIKLAASQSYGLYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEEMLPPEQAA CCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHCCCHHHHCCHHHHH QIVHYHMQPEFKKNNLFSGLTQGIEGIAQFTYIKANLSPLDALANHLFANPQRSLPCLAW HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCHHHHH TLLIIVAIVVLWRFTTHPGPGIWMISMITPMVWFFCFQDDVIIRRVSVVCFSLFFAATCW HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QRLAVIFHMCRVFPMMLAPKNKNAKVKKQKTTQQVSQSERNSLFVVLLIIVVGWCLVFAS HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC NKDIAFISTIIGLIDHFIGPITIAGIVLLIIVAKFTGNLKLGSGHKSNRKTGNRNAHSRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC SSKNSFRGGGGSSGGGGSSDRW CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]