| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218547692
Identifier: 218547692
GI number: 218547692
Start: 285945
End: 286943
Strand: Reverse
Name: 218547692
Synonym: EFER_0272
Alternate gene names: NA
Gene position: 286943-285945 (Counterclockwise)
Preceding gene: 218547693
Following gene: 218547687
Centisome position: 6.25
GC content: 43.64
Gene sequence:
>999_bases TTGACGCAAAAATTACATTTAAAAAGGAACTTCGCAATGAAAACCAGAACGATCTTAGCCTCTCTCATTACCTGTTCACT CAGTTTTAGTGCTTACGCAGCAACTGACTGGCCGACAAAGCCTGTTGAATTTGTGATCACCGCAAGTGCCGGTGGTGACA CCGATATGAACGCTCGTCTGTTGGCAAAATATTTCAAGGAAGTCGCAGGAGTTCCGCTGGTCATTACGAATATGCCCGGT TCTGCAGGCAGTATTGCGACCACTAACGTCAAGAATGCTGCGGCTGATGGCACCAAGGCCGTATTCTGCCATACCGGCCA TATGGTCATTAACAAAATGACGGGTATCGTCGACTACAACTATAAAGATTTTGATATTGCCACGATTGCCGGGATGAACA GAACTTATGTTCTGACAGCAAGTAAAAAATCAGGTATTAACTCACTTGACGACTTAATCGCTAAGGCTAAAGCGGAACCT GGCAAGGTAATTTATGGTACTGAATTCGGCGGCTTAACTTACACGCAGGGTTTAAAACTTGAACAAATGGCAGGAATTAA ACTCAAAACCGTGGATGCTGGCACCGCGGCTGATCGCGTAATTGGTTTATTAAGTGGTCGTATTGACCTGGGTGTCGTTG CTTATTCTGCGGTTAAGGATTACCAGACTACCGGGAAAATGACCATTCTTGCGCAAGGGGGACCTGAGCGTAATCCATTA TTTGGTGATTTCCCGACATTTGTCGAAAAAGGAATTAACTACACCAGTGAATTCCCTTATGTTGTCGCTTTCCCCAAAGG CACCAATCCTGAAATTCTGCAAAAAATGGGGGAAATTATCAAAAAAATCCAGGATAACCCTAAATATCAGGAAGAGTTAC GTACTTCACTGCAACAAGAACCTTTCTGGCTTGATCGGGACCAGGCAAATGCTTATCTCGATAAAACTCAGCAAGAGCTC GAACCTTTTAAAGATATGCTGAAATCTGCAAAGAAATAA
Upstream 100 bases:
>100_bases TGTTACTACACCTATTTCTTGTTTGTTTATCGTCTTGTCAATCGTTTCTATTCTGCTGTGTATTTGGAGTGAATGGAAAA AAGCGAAAGCAAGAAAATAA
Downstream 100 bases:
>100_bases TCTCCCCCACTCTCAATAATTCGCGTCGTAGCACCTGCAACGTGAAGTATGACGAGTATGCCCCGGCGTATAATTGCGCC GGGGTCTCGATTTGAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTQKLHLKRNFAMKTRTILASLITCSLSFSAYAATDWPTKPVEFVITASAGGDTDMNARLLAKYFKEVAGVPLVITNMPG SAGSIATTNVKNAAADGTKAVFCHTGHMVINKMTGIVDYNYKDFDIATIAGMNRTYVLTASKKSGINSLDDLIAKAKAEP GKVIYGTEFGGLTYTQGLKLEQMAGIKLKTVDAGTAADRVIGLLSGRIDLGVVAYSAVKDYQTTGKMTILAQGGPERNPL FGDFPTFVEKGINYTSEFPYVVAFPKGTNPEILQKMGEIIKKIQDNPKYQEELRTSLQQEPFWLDRDQANAYLDKTQQEL EPFKDMLKSAKK
Sequences:
>Translated_332_residues MTQKLHLKRNFAMKTRTILASLITCSLSFSAYAATDWPTKPVEFVITASAGGDTDMNARLLAKYFKEVAGVPLVITNMPG SAGSIATTNVKNAAADGTKAVFCHTGHMVINKMTGIVDYNYKDFDIATIAGMNRTYVLTASKKSGINSLDDLIAKAKAEP GKVIYGTEFGGLTYTQGLKLEQMAGIKLKTVDAGTAADRVIGLLSGRIDLGVVAYSAVKDYQTTGKMTILAQGGPERNPL FGDFPTFVEKGINYTSEFPYVVAFPKGTNPEILQKMGEIIKKIQDNPKYQEELRTSLQQEPFWLDRDQANAYLDKTQQEL EPFKDMLKSAKK >Mature_331_residues TQKLHLKRNFAMKTRTILASLITCSLSFSAYAATDWPTKPVEFVITASAGGDTDMNARLLAKYFKEVAGVPLVITNMPGS AGSIATTNVKNAAADGTKAVFCHTGHMVINKMTGIVDYNYKDFDIATIAGMNRTYVLTASKKSGINSLDDLIAKAKAEPG KVIYGTEFGGLTYTQGLKLEQMAGIKLKTVDAGTAADRVIGLLSGRIDLGVVAYSAVKDYQTTGKMTILAQGGPERNPLF GDFPTFVEKGINYTSEFPYVVAFPKGTNPEILQKMGEIIKKIQDNPKYQEELRTSLQQEPFWLDRDQANAYLDKTQQELE PFKDMLKSAKK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 36299; Mature: 36168
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKLHLKRNFAMKTRTILASLITCSLSFSAYAATDWPTKPVEFVITASAGGDTDMNARL CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCCCCCCCHHHH LAKYFKEVAGVPLVITNMPGSAGSIATTNVKNAAADGTKAVFCHTGHMVINKMTGIVDYN HHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHHHHHHEEECC YKDFDIATIAGMNRTYVLTASKKSGINSLDDLIAKAKAEPGKVIYGTEFGGLTYTQGLKL CCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCH EQMAGIKLKTVDAGTAADRVIGLLSGRIDLGVVAYSAVKDYQTTGKMTILAQGGPERNPL HHHCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC FGDFPTFVEKGINYTSEFPYVVAFPKGTNPEILQKMGEIIKKIQDNPKYQEELRTSLQQE CCCCHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC PFWLDRDQANAYLDKTQQELEPFKDMLKSAKK CCEECCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQKLHLKRNFAMKTRTILASLITCSLSFSAYAATDWPTKPVEFVITASAGGDTDMNARL CCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCCCCCCCHHHH LAKYFKEVAGVPLVITNMPGSAGSIATTNVKNAAADGTKAVFCHTGHMVINKMTGIVDYN HHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHHHHHHEEECC YKDFDIATIAGMNRTYVLTASKKSGINSLDDLIAKAKAEPGKVIYGTEFGGLTYTQGLKL CCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCH EQMAGIKLKTVDAGTAADRVIGLLSGRIDLGVVAYSAVKDYQTTGKMTILAQGGPERNPL HHHCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC FGDFPTFVEKGINYTSEFPYVVAFPKGTNPEILQKMGEIIKKIQDNPKYQEELRTSLQQE CCCCHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC PFWLDRDQANAYLDKTQQELEPFKDMLKSAKK CCEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]