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The map label for this gene is yafV [H]

Identifier: 218547666

GI number: 218547666

Start: 258751

End: 259521

Strand: Reverse

Name: yafV [H]

Synonym: EFER_0245

Alternate gene names: 218547666

Gene position: 259521-258751 (Counterclockwise)

Preceding gene: 218547668

Following gene: 218547664

Centisome position: 5.66

GC content: 54.86

Gene sequence:

>771_bases
GTGCCTGGTTTGAAGATTACGCTTTTGCAGCAACCACTGGTGTGGATGGATGGTCCTGCCAACCTGCGCCATTTTGATCG
TCAACTGGAAGGTATTACCGGGCGCGATGTGATCGTTCTACCGGAGATGTTTACCAGCGGCTTTGCCATGGAAGCGGCAG
CTTCGTCGCTAGCACAAGATGACGTAGTGAACTGGATGACAGCCAAAGCGCAGCAGTGCAATGCGCTGATTGCCGGCAGT
GTTGCATTACAAACGGAGTCTGGTTCGGTTAATCGCTTTTTGCTGGTTGAGCCGGGCGGCAAGGTGCATTTTTATGACAA
GCGTCATCTGTTCCGAATGGCAGATGAGCATCTTCATTATAAAGCGGGCAATGCGCGAGTGATTGTGGAATGGCGCGGCT
GGCGTATTTTGCCGCTGGTGTGCTACGACTTACGTTTTCCGGTGTGGTCGCGCAATCTCAACGATTATGACCTCGCCCTG
TACGTCGCCAACTGGCCTGCTCCGCGCTCTCTGCACTGGCAGGCATTGCTGACGGCCCGCGCGATTGAGAATCAGGCGTA
TGTGGCGGGATGTAATCGCGTCGGCAGCGATGGCAACGGCTGCCATTATCGCGGTGACAGCCGGGTGATTAATCCACAGG
GCGAGATTATCGCTACTGCCGATGCGCATCAGGCAACGCGCATTGATGCGGAGCTGTCGATGGCGGTGTTAAGGGAATAT
CGCGAAAAGTTTCCGGCATGGCAGGATGCGGATGAATTCACATTGCGTTAG

Upstream 100 bases:

>100_bases
TTCCAATATCAGCATTTGTTATCAATTTATTCTGCGCTAAGGCAACTGCCTGATAAGGTGTTAAAGTTATAAAACCCTTC
ACATAAAGGAATTGTACACC

Downstream 100 bases:

>100_bases
GGGGTAAATATGGCTACGAGATAAGTTTCGTGGCTATTTTTTTCTGGAACTTAAACGACGAAAGCCTGAATCATTACTGA
CTCAGGCTTTCTGAATATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGS
VALQTESGSVNRFLLVEPGGKVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAL
YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAVLREY
REKFPAWQDADEFTLR

Sequences:

>Translated_256_residues
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGS
VALQTESGSVNRFLLVEPGGKVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAL
YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAVLREY
REKFPAWQDADEFTLR
>Mature_255_residues
PGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSV
ALQTESGSVNRFLLVEPGGKVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALY
VANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAVLREYR
EKFPAWQDADEFTLR

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=255, Percent_Identity=98.8235294117647, Blast_Score=524, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 28895; Mature: 28764

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQD
CCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCEEEECHHHCCCCHHHHHHHHHHHH
DVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGKVHFYDKRHLFRMADEHLHY
HHHHHHHHHHHHCCEEEECEEEEEECCCCCEEEEEECCCCEEEEECHHHHHHHHHHHEEE
KAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTAR
ECCCEEEEEEECCCEEEEEEEEECCCCHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
AIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAVLREY
HHCCCEEEEECCCCCCCCCCCEECCCCEEECCCCCEEEECCCCCCEECCHHHHHHHHHHH
REKFPAWQDADEFTLR
HHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQD
CCCEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCEEEECHHHCCCCHHHHHHHHHHHH
DVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGKVHFYDKRHLFRMADEHLHY
HHHHHHHHHHHHCCEEEECEEEEEECCCCCEEEEEECCCCEEEEECHHHHHHHHHHHEEE
KAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTAR
ECCCEEEEEEECCCEEEEEEEEECCCCHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
AIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAVLREY
HHCCCEEEEECCCCCCCCCCCEECCCCEEECCCCCEEEECCCCCCEECCHHHHHHHHHHH
REKFPAWQDADEFTLR
HHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]