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The map label for this gene is yadE [H]

Identifier: 218547586

GI number: 218547586

Start: 166735

End: 167961

Strand: Direct

Name: yadE [H]

Synonym: EFER_0151

Alternate gene names: 218547586

Gene position: 166735-167961 (Clockwise)

Preceding gene: 218547585

Following gene: 218547588

Centisome position: 3.63

GC content: 44.58

Gene sequence:

>1227_bases
ATGATTAAAAAGATTATTTTTTTACTGCTGCTGGTTTCATCTGGTGTCAGTGCAGCACTTCCCGCGCGTTATATGCAAAC
GACTCAGGATGCGGCTATCTGGGGAAAAATTGGCGACAAAACGGTTACCGTTGGCAACATTCGTGCCGGGCAGATTATTT
CGGTCATCCCAACTGCAGCTGATTATTATGAATTCAATTTTGGTTTTGCTACGGGATATATTGATAAGGGGCATCTGGAA
CCTGTACAAGGGCGACAAAAAGTTGAAGATGGCCTGGGGGATCTGAATAAGCCACTGAGTAACCAAAATATTATTACATG
GAAAGATACTCCGATATACAACGCGCCTGATGCGGGTAGTGCGCCATTTGGCGTGCTGGCCGATAATTTGCGATACCCCA
TTATTAATAAATTAAAAGATCGTCTGAATCAAACCTGGTACCAAATTCGTATTGGCGAACGACTGGCCTATATCAGTGCG
CTGGATGCGCAGCAGGATAACGGTATTCCTGTATTGACCTACCATCATATTTTACGCGATGAAGAGAACACCCGTTTTCG
TCATACGTCGACCACGACGTCGGTGCGAGCTTTCAATAACCAGATGACCTGGTTGCGCGATCGTGGATATACCACGTTAA
CCTTGTATCAACTGGAAGGGTATCTGCGTAATTCAATGAATCTTCCGGCTCGCGCGGTGGTACTGACGTTTGATGATGGC
TTGAAATCAGTGAGTCGTTATGCATATCCCATTCTGAAAAAATACGGTATGAAGGCGACGGCATTTATTATTACTTCGCG
TATTAAACGTCATCCACAAAAATGGAATCCTCAGTCATTACAGTTTATGAGTATTTCTGAACTGCGAGATGTTCGTGATG
TTTTTGATTTCCAGTCACATACTCATTTTTTACATCGGGTCGATGGATATCGCCGACCCATATTACTCAGCCGCAGTGAG
CATAATATTCTTTTTGATTTCGAACGTTCTCGCCGGGCGTTAAACCAATTTAATCCACATGTTTTGTATCTTTCTTATCC
GTTTGGTGGATTTAATGACAAAGCCGTGAAGGCTGCAAACGATGCCGGATTTCACCTGGCGGTGACGACCATGAAAGGCA
AAGTAAAACCGGGGGATAATCCGTTGTTACTAAAACGGCTTTATATCTTGAGAACGGATTCGCTGGAGACGATGTCGCGG
CTGGTGAGTAACCAGCCGCAGGGGTGA

Upstream 100 bases:

>100_bases
AGAATCCCCCCTTTGTCCTCAAGCATAATTGGTTCGAGTATTAAATCGCATTCCGATTTTGTTACACTAACGGCGCTGTT
TCTCGCCTGGTAGTTTTCTC

Downstream 100 bases:

>100_bases
TTATCAGGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCGTTGTCGCCTTCAAAGTAGGCAACGTTGGGCC
GCCATGTACGGGCTTCTTCA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MIKKIIFLLLLVSSGVSAALPARYMQTTQDAAIWGKIGDKTVTVGNIRAGQIISVIPTAADYYEFNFGFATGYIDKGHLE
PVQGRQKVEDGLGDLNKPLSNQNIITWKDTPIYNAPDAGSAPFGVLADNLRYPIINKLKDRLNQTWYQIRIGERLAYISA
LDAQQDNGIPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMTWLRDRGYTTLTLYQLEGYLRNSMNLPARAVVLTFDDG
LKSVSRYAYPILKKYGMKATAFIITSRIKRHPQKWNPQSLQFMSISELRDVRDVFDFQSHTHFLHRVDGYRRPILLSRSE
HNILFDFERSRRALNQFNPHVLYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSR
LVSNQPQG

Sequences:

>Translated_408_residues
MIKKIIFLLLLVSSGVSAALPARYMQTTQDAAIWGKIGDKTVTVGNIRAGQIISVIPTAADYYEFNFGFATGYIDKGHLE
PVQGRQKVEDGLGDLNKPLSNQNIITWKDTPIYNAPDAGSAPFGVLADNLRYPIINKLKDRLNQTWYQIRIGERLAYISA
LDAQQDNGIPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMTWLRDRGYTTLTLYQLEGYLRNSMNLPARAVVLTFDDG
LKSVSRYAYPILKKYGMKATAFIITSRIKRHPQKWNPQSLQFMSISELRDVRDVFDFQSHTHFLHRVDGYRRPILLSRSE
HNILFDFERSRRALNQFNPHVLYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSR
LVSNQPQG
>Mature_408_residues
MIKKIIFLLLLVSSGVSAALPARYMQTTQDAAIWGKIGDKTVTVGNIRAGQIISVIPTAADYYEFNFGFATGYIDKGHLE
PVQGRQKVEDGLGDLNKPLSNQNIITWKDTPIYNAPDAGSAPFGVLADNLRYPIINKLKDRLNQTWYQIRIGERLAYISA
LDAQQDNGIPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMTWLRDRGYTTLTLYQLEGYLRNSMNLPARAVVLTFDDG
LKSVSRYAYPILKKYGMKATAFIITSRIKRHPQKWNPQSLQFMSISELRDVRDVFDFQSHTHFLHRVDGYRRPILLSRSE
HNILFDFERSRRALNQFNPHVLYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSR
LVSNQPQG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=406, Percent_Identity=86.4532019704433, Blast_Score=753, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 46521; Mature: 46521

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKIIFLLLLVSSGVSAALPARYMQTTQDAAIWGKIGDKTVTVGNIRAGQIISVIPTAA
CHHHHHHHHHHHHCCCCHHHCHHHHHCCCCHHEEECCCCCEEEEECCCCCCEEEEECCCC
DYYEFNFGFATGYIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNIITWKDTPIYNAPDAGS
CCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
APFGVLADNLRYPIINKLKDRLNQTWYQIRIGERLAYISALDAQQDNGIPVLTYHHILRD
CCHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCEEEHHHHCCCCCCCCEEEEEHHHHCC
EENTRFRHTSTTTSVRAFNNQMTWLRDRGYTTLTLYQLEGYLRNSMNLPARAVVLTFDDG
CCCCEEEECCCCCEEEECCCCEEEEECCCCEEEEEEEEHHHHHHCCCCCEEEEEEEECHH
LKSVSRYAYPILKKYGMKATAFIITSRIKRHPQKWNPQSLQFMSISELRDVRDVFDFQSH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
THFLHRVDGYRRPILLSRSEHNILFDFERSRRALNQFNPHVLYLSYPFGGFNDKAVKAAN
HHHHHHHCCCCCCEEEECCCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECC
DAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQPQG
CCCEEEEEEEEECCCCCCCCHHHEEEEEEHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKKIIFLLLLVSSGVSAALPARYMQTTQDAAIWGKIGDKTVTVGNIRAGQIISVIPTAA
CHHHHHHHHHHHHCCCCHHHCHHHHHCCCCHHEEECCCCCEEEEECCCCCCEEEEECCCC
DYYEFNFGFATGYIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNIITWKDTPIYNAPDAGS
CCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
APFGVLADNLRYPIINKLKDRLNQTWYQIRIGERLAYISALDAQQDNGIPVLTYHHILRD
CCHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCEEEHHHHCCCCCCCCEEEEEHHHHCC
EENTRFRHTSTTTSVRAFNNQMTWLRDRGYTTLTLYQLEGYLRNSMNLPARAVVLTFDDG
CCCCEEEECCCCCEEEECCCCEEEEECCCCEEEEEEEEHHHHHHCCCCCEEEEEEEECHH
LKSVSRYAYPILKKYGMKATAFIITSRIKRHPQKWNPQSLQFMSISELRDVRDVFDFQSH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
THFLHRVDGYRRPILLSRSEHNILFDFERSRRALNQFNPHVLYLSYPFGGFNDKAVKAAN
HHHHHHHCCCCCCEEEECCCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECC
DAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQPQG
CCCEEEEEEEEECCCCCCCCHHHEEEEEEHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]