| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is imp [H]
Identifier: 218547504
GI number: 218547504
Start: 65283
End: 67634
Strand: Reverse
Name: imp [H]
Synonym: EFER_0065
Alternate gene names: 218547504
Gene position: 67634-65283 (Counterclockwise)
Preceding gene: 218547506
Following gene: 218547503
Centisome position: 1.47
GC content: 49.79
Gene sequence:
>2352_bases ATGAAAAAACGTATCCCCACCCTCCTGGCCACCATGATTGCCACCGCCCTTTACAGTCAACAGGGCCTGGCAGCCGATCT CGCCTCACAGTGTATGTTGGGCGTGCCGAGCTATGACCGTCCTCTGGTGAAGGGCGACACGAACGAACTGCCCGTGACGA TTAATGCTGACGACGCCAAAGGGAATTATCCTGATGACGCAGTGTTTTCCGGCAATGTAGATATCATGCAAGGGAACAGT CGACTGCAGGCCGATGAAGTGCAACTTCATCAAAAAGAAGCACCAGGCGAGCCAGAACCGATTCGTACTGTTGATGCGCT CGGTAATGTCCATTACGACGACAACCAGGTCATTCTGAAAGGGCCAAAGGGATGGGCGAATCTGAACACCAAAGATACTA ACGTCTGGGAAGGGGATTACCAGATGGTGGGTCGTCAGGGGCGCGGTAAAGCGGACCTGATGAAACAACGAGGCGAAAAC CGTTATACCATTCTGGATAACGGCAGCTTTACCTCCTGCTTACCGGGGTCCGATACCTGGAGCGTGGTGGGGAGCGAAAT TATCCATGACCGCGAAGAGCAAGTAGCCGAAATCTGGAACGCCCGTTTTAAAGTTGGCCCGGTGCCAATCTTCTACAGCC CCTATTTGCAGTTACCGGTGGGTGACAAACGCCGCTCCGGTTTCTTGATCCCAAACGCCAAGTACACGACCAAGAACTAC TTTGAGTTCTACCTGCCATATTACTGGAACATCGCGCCAAATATGGATGCCACCATCACGCCGCATTATATGCATCGTCG TGGCAACATTATGTGGGAGAACGAGTTCCGCTACCTCTCCCAGGCGGGCGCAGGCTTGATGGAACTGGACTATCTGCCTT CAGATAAAGTCTATGAAGATGAACACCCGAACGATGATAACTCACGTCGTTGGTTATTTTACTGGCAACACTCTGGTGTA ATGGATCAGGTGTGGCGCTTCAATATTGACTACACCAAAGTTAGTGATCCAAGTTATTTCAACGACTTTGATAATAAGTA CGGTTCCAGTACCGACGGCTACGCTACGCAAAAATTCAGCGTCGGTTACGCAGTACAGAACTTTGACGCCACACTTTCGA CCAAACAGTTTCAGGTCTTTGACGATAACAGTGGTAACAGTTACGCCGCTGAGCCGCAGTTAGACGTCAACTACTACCAT AACGATCTCGGTCCGTTTGATACCCGTATCTATGGTCAGGCAGTGCATTTTGTAAATACCAATAGCAATATGCCAGAAGC CACACGTCTGCACCTTGAACCGACGATCAATCTCCCGTTGTCGAACAACTGGGGCAGTTTAAATACCGAAGCCAAACTGC TGGCGACACACTATCAGCAGACCAATCTTGACTGGTATAACGCCAGAAATACAAACAAGCTGGCTGATTCTGTTAACCGT GTAATGCCGCAATTTAAAGTTGATGGCAAAATGGTCTTTGAGCGTGACATGAATCTGCTGGCGCCTGGCTTTACCCAGAC ACTGGAACCACGCGCGCAGTATCTGTACGTACCCTATCGCGATCAGAGCGACATCTACAATTTCGACTCTTCTCTGTTGC AGTTTGACTATAGCGGCCTGTTCCGCGACCGTACTTATGGTGGTCTGGACCGCATCGCATCAGCAAACCAGGTTACGACC GGTGTCACATCTCGTATATATGATGAAAATGCCGTTGAACGTTTTAACGTTTCTGTTGGTCAAATCTACTATTTCAGCGA GTCTCGCACTGGCGATGACCACATAAAATGGGAGAAAGACGACGATAAAGGTTCACTGGTGTGGGCTGGTGATACTTACT GGCGAATCTCCGAGCGTTGGGGTGTACGGGGTGGTGTGCAGTACGACACTCGTCTGGATAACGTCGCGACCAGTAATGCC AGCATTGAGTACCGTCGGGATCAAGACCGTCTGGTACAGCTAAATTACCGCTATGCCAGCCCGGAATATATTCAGGCGAC ATTGCCACGTTATTCCACCTCTGAACAATATAATAAGGGGATTTCGCAGGTAGGTGGCGTAGCCAGTTGGCCATTTGCTG ATCGCTGGTCGATTGTCGGGGCTTACTACTTCGATACCAATGTGAACAAACCAGCCGACTCCATGTTAGGCGTGCAGTAC AGTTCCTGCTGTTATGCGATTCGTGTCGGTTACGAGCGTAAGCTGAACGGCTGGGATAATGATAAACAACATGCAGTTTA TGACGACGTAATCGGCTTTAACATCGAACTTCGTGGCCTGAGCTCTAACTATGGCCTCGGCACGCAAGAGATGTTGCGTT CGAACATTCTGCCGTATCAAAACTCTTTGTGA
Upstream 100 bases:
>100_bases TCGGGCAGGATTAACACTAGCGTAGAGATGATGAGTACGTTAGTCTCTGACCGTTTGCCGCGCGCAACGTTACCGATGAT GGAACAATAAAATTCAACGT
Downstream 100 bases:
>100_bases TTTGATTGAGTTACAACGTAATCCGCATTGCGGCTAATTGAAATGGAAAAAGTATGAAGAACTGGAAAACGCTGCTTCTC GGTATCGCCATGATCGCGAA
Product: organic solvent tolerance protein
Products: NA
Alternate protein names: Organic solvent tolerance protein [H]
Number of amino acids: Translated: 783; Mature: 783
Protein sequence:
>783_residues MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVKGDTNELPVTINADDAKGNYPDDAVFSGNVDIMQGNS RLQADEVQLHQKEAPGEPEPIRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDNSRRWLFYWQHSGV MDQVWRFNIDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFDATLSTKQFQVFDDNSGNSYAAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTNSNMPEATRLHLEPTINLPLSNNWGSLNTEAKLLATHYQQTNLDWYNARNTNKLADSVNR VMPQFKVDGKMVFERDMNLLAPGFTQTLEPRAQYLYVPYRDQSDIYNFDSSLLQFDYSGLFRDRTYGGLDRIASANQVTT GVTSRIYDENAVERFNVSVGQIYYFSESRTGDDHIKWEKDDDKGSLVWAGDTYWRISERWGVRGGVQYDTRLDNVATSNA SIEYRRDQDRLVQLNYRYASPEYIQATLPRYSTSEQYNKGISQVGGVASWPFADRWSIVGAYYFDTNVNKPADSMLGVQY SSCCYAIRVGYERKLNGWDNDKQHAVYDDVIGFNIELRGLSSNYGLGTQEMLRSNILPYQNSL
Sequences:
>Translated_783_residues MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVKGDTNELPVTINADDAKGNYPDDAVFSGNVDIMQGNS RLQADEVQLHQKEAPGEPEPIRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDNSRRWLFYWQHSGV MDQVWRFNIDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFDATLSTKQFQVFDDNSGNSYAAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTNSNMPEATRLHLEPTINLPLSNNWGSLNTEAKLLATHYQQTNLDWYNARNTNKLADSVNR VMPQFKVDGKMVFERDMNLLAPGFTQTLEPRAQYLYVPYRDQSDIYNFDSSLLQFDYSGLFRDRTYGGLDRIASANQVTT GVTSRIYDENAVERFNVSVGQIYYFSESRTGDDHIKWEKDDDKGSLVWAGDTYWRISERWGVRGGVQYDTRLDNVATSNA SIEYRRDQDRLVQLNYRYASPEYIQATLPRYSTSEQYNKGISQVGGVASWPFADRWSIVGAYYFDTNVNKPADSMLGVQY SSCCYAIRVGYERKLNGWDNDKQHAVYDDVIGFNIELRGLSSNYGLGTQEMLRSNILPYQNSL >Mature_783_residues MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVKGDTNELPVTINADDAKGNYPDDAVFSGNVDIMQGNS RLQADEVQLHQKEAPGEPEPIRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDNSRRWLFYWQHSGV MDQVWRFNIDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFDATLSTKQFQVFDDNSGNSYAAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTNSNMPEATRLHLEPTINLPLSNNWGSLNTEAKLLATHYQQTNLDWYNARNTNKLADSVNR VMPQFKVDGKMVFERDMNLLAPGFTQTLEPRAQYLYVPYRDQSDIYNFDSSLLQFDYSGLFRDRTYGGLDRIASANQVTT GVTSRIYDENAVERFNVSVGQIYYFSESRTGDDHIKWEKDDDKGSLVWAGDTYWRISERWGVRGGVQYDTRLDNVATSNA SIEYRRDQDRLVQLNYRYASPEYIQATLPRYSTSEQYNKGISQVGGVASWPFADRWSIVGAYYFDTNVNKPADSMLGVQY SSCCYAIRVGYERKLNGWDNDKQHAVYDDVIGFNIELRGLSSNYGLGTQEMLRSNILPYQNSL
Specific function: Together with lptE, is involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptD family [H]
Homologues:
Organism=Escherichia coli, GI1786239, Length=784, Percent_Identity=91.9642857142857, Blast_Score=1519, Evalue=0.0,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020889 - InterPro: IPR005653 - InterPro: IPR007543 [H]
Pfam domain/function: PF03968 OstA; PF04453 OstA_C [H]
EC number: NA
Molecular weight: Translated: 89587; Mature: 89587
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVKGDTNELPVTINADDAK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEECCCCC GNYPDDAVFSGNVDIMQGNSRLQADEVQLHQKEAPGEPEPIRTVDALGNVHYDDNQVILK CCCCCCCEEECCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCEEECCCEEEEE GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTW CCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCCEECCCCCHH SVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY HHHHHHHHHCHHHHHHHHHCCCEEECCEEEEECCEEECCCCCCCCCCEECCCCCCCCCCE FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYED EEEEEEEEEEECCCCCCEECHHHHHHCCCEEEEHHHHHHHHCCCCEEEEECCCCCCCCCC EHPNDDNSRRWLFYWQHSGVMDQVWRFNIDYTKVSDPSYFNDFDNKYGSSTDGYATQKFS CCCCCCCCCEEEEEEECCCCHHHHHEECCCEEECCCCCHHCHHHHHCCCCCCCCEEEEEE VGYAVQNFDATLSTKQFQVFDDNSGNSYAAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNT ECEEEECCCCEECCEEEEEEECCCCCCEECCCEEEEEEEECCCCCCCCEEEEEEEEEEEC NSNMPEATRLHLEPTINLPLSNNWGSLNTEAKLLATHYQQTNLDWYNARNTNKLADSVNR CCCCCCCEEEEECEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCEECCCCCHHHHHHHHH VMPQFKVDGKMVFERDMNLLAPGFTQTLEPRAQYLYVPYRDQSDIYNFDSSLLQFDYSGL HCCCEECCCEEEEECCCCCCCCCCHHCCCCCCCEEEEEECCCCCHHHCCCHHHHCCCCHH FRDRTYGGLDRIASANQVTTGVTSRIYDENAVERFNVSVGQIYYFSESRTGDDHIKWEKD CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHCCCEEEEEEEEECCCCCCCCEEECCC DDKGSLVWAGDTYWRISERWGVRGGVQYDTRLDNVATSNASIEYRRDQDRLVQLNYRYAS CCCCCEEECCCCEEEEEHHCCCCCCCEECCCCCCEECCCCEEEEECCCCEEEEEEEEECC PEYIQATLPRYSTSEQYNKGISQVGGVASWPFADRWSIVGAYYFDTNVNKPADSMLGVQY CHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCH SSCCYAIRVGYERKLNGWDNDKQHAVYDDVIGFNIELRGLSSNYGLGTQEMLRSNILPYQ HCEEEEEEECCEEECCCCCCCCCCEEEHHEEEEEEEEEECCCCCCCCHHHHHHHCCCCCC NSL CCC >Mature Secondary Structure MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVKGDTNELPVTINADDAK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEECCCCC GNYPDDAVFSGNVDIMQGNSRLQADEVQLHQKEAPGEPEPIRTVDALGNVHYDDNQVILK CCCCCCCEEECCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCEEECCCEEEEE GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTW CCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCCEECCCCCHH SVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY HHHHHHHHHCHHHHHHHHHCCCEEECCEEEEECCEEECCCCCCCCCCEECCCCCCCCCCE FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYED EEEEEEEEEEECCCCCCEECHHHHHHCCCEEEEHHHHHHHHCCCCEEEEECCCCCCCCCC EHPNDDNSRRWLFYWQHSGVMDQVWRFNIDYTKVSDPSYFNDFDNKYGSSTDGYATQKFS CCCCCCCCCEEEEEEECCCCHHHHHEECCCEEECCCCCHHCHHHHHCCCCCCCCEEEEEE VGYAVQNFDATLSTKQFQVFDDNSGNSYAAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNT ECEEEECCCCEECCEEEEEEECCCCCCEECCCEEEEEEEECCCCCCCCEEEEEEEEEEEC NSNMPEATRLHLEPTINLPLSNNWGSLNTEAKLLATHYQQTNLDWYNARNTNKLADSVNR CCCCCCCEEEEECEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCEECCCCCHHHHHHHHH VMPQFKVDGKMVFERDMNLLAPGFTQTLEPRAQYLYVPYRDQSDIYNFDSSLLQFDYSGL HCCCEECCCEEEEECCCCCCCCCCHHCCCCCCCEEEEEECCCCCHHHCCCHHHHCCCCHH FRDRTYGGLDRIASANQVTTGVTSRIYDENAVERFNVSVGQIYYFSESRTGDDHIKWEKD CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHCCCEEEEEEEEECCCCCCCCEEECCC DDKGSLVWAGDTYWRISERWGVRGGVQYDTRLDNVATSNASIEYRRDQDRLVQLNYRYAS CCCCCEEECCCCEEEEEHHCCCCCCCEECCCCCCEECCCCEEEEECCCCEEEEEEEEECC PEYIQATLPRYSTSEQYNKGISQVGGVASWPFADRWSIVGAYYFDTNVNKPADSMLGVQY CHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCH SSCCYAIRVGYERKLNGWDNDKQHAVYDDVIGFNIELRGLSSNYGLGTQEMLRSNILPYQ HCEEEEEEECCEEECCCCCCCCCCEEEHHEEEEEEEEEECCCCCCCCHHHHHHHCCCCCC NSL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA