| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is livK [C]
Identifier: 218533212
GI number: 218533212
Start: 5723344
End: 5724534
Strand: Reverse
Name: livK [C]
Synonym: Mchl_5340
Alternate gene names: 218533212
Gene position: 5724534-5723344 (Counterclockwise)
Preceding gene: 218533214
Following gene: 218533211
Centisome position: 99.08
GC content: 68.35
Gene sequence:
>1191_bases ATGCCCCAACGCCTCAAGCCCACCCGCTCCCTCGCACGGCGTTTCGTCCTCGGCGCCCTTTTGGCGGGGGTTACCAGCAT CGGTGCCGTCCGGGCCGCAGAGCCGGTGAAGATCGGTCTCGTCACCGCCCTCAGCGGCCAATCTGCGAAATCGGGCGAGG CGATCTCCCGCGGGATTGGGCTGGCGATCGAAGAGATCAACCGCAACGGCGGCGTCCTCGGCCGCCCGCTGGAACTCGTC GCCCGCGACGACGAGGCCAACCCGTCCAAGGGCGTGCTCGCCGCCCGAGAGCTGATCCAGCGGGCCGGCGTGGTCGCGCT GATCGGCGGTCTCGACACGCCGGTCTCGATGGCAATCGTGCCGATCGCCAACCAGATGAAGGTGCCCTTCGTCGGCCCTT GGGCGGCCGGCACCGGCATCACCCGCAACGGCGCGGTCGACAACTATGTCTTCCGGGTTTCCGCGGTCGATGCGCTCGTG GACGAGGCCCTCGTGGCCTACGCGGTCAAGACCTACGGCGCCAAGAAACCCGGCGCGATCCTCGTCAACAACGCCTGGGG CGAGTCGAACCAGCAGGGGCTGGTCTCGGCGCTGAAGGCCGCGGGTCTCCCCAGCGCCGGCATCGAAAAGTACGAGGCCA ACGACATCGACATGGTCCCGCAACTCTCCCGCCTGCGGGAGGCCGGGGCCGACGCGCTGTTCCTCGTCGGCAATGTCGGC CCCTCGGCCCAGGTGGTGAAGTCCCTCGATCGGATGGGCTGGACCGTGCCGGTGATCTCCCATTGGGGACCGGCGGGCGG GCGCTTCGACGAACTCGCTGGGCCGGGTGCGGCGCGGGTGCACTTCGTCCAGACCTTCACCTTCGCGGGCAACGACAGCC CGAAGGCGAAGGCGGTACTCGACGCGCTGAAGGCGAAGTACCCGGCGATCAAGTCCATGGCTGACGTCACGCCCGCCGTC GGCATCGCCAACGCCTACGACGCCACGCACCTGATCGCCCTGGCGATCCAGGCAGCGGGCGCCACCGAGGGGCCGAAGGT TCGCGACGGCTTCTACAAGGTCGCGCCCTATTCCGGCCTGATCAAGACCTACGAAGCGCCGTTCGCACCGGGCCAGCACG ACGCCTTGAAGCCGGACGACTACATCTTCGCAAGCTTCAAGAACGGCGAGATCGTCGCGGTGTCCAAGTGA
Upstream 100 bases:
>100_bases GCGGCGGGCTCCGGGCGGGAAAATGCGAGAAGAAACAAGCACGTTTCATCTGGCACGCCCGTTGCGGTCATTGGTCGACC GCATACGGAGCCGGATCGCC
Downstream 100 bases:
>100_bases ACGGCGTCCGGAGCCGTCTTCCCGGAAGAGGGCAGGGGATGATGTCACCATGCTGACCAGCACCCTCGTCAGCGGGCTCG GCCTCGGCAGCATGTACGGG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MPQRLKPTRSLARRFVLGALLAGVTSIGAVRAAEPVKIGLVTALSGQSAKSGEAISRGIGLAIEEINRNGGVLGRPLELV ARDDEANPSKGVLAARELIQRAGVVALIGGLDTPVSMAIVPIANQMKVPFVGPWAAGTGITRNGAVDNYVFRVSAVDALV DEALVAYAVKTYGAKKPGAILVNNAWGESNQQGLVSALKAAGLPSAGIEKYEANDIDMVPQLSRLREAGADALFLVGNVG PSAQVVKSLDRMGWTVPVISHWGPAGGRFDELAGPGAARVHFVQTFTFAGNDSPKAKAVLDALKAKYPAIKSMADVTPAV GIANAYDATHLIALAIQAAGATEGPKVRDGFYKVAPYSGLIKTYEAPFAPGQHDALKPDDYIFASFKNGEIVAVSK
Sequences:
>Translated_396_residues MPQRLKPTRSLARRFVLGALLAGVTSIGAVRAAEPVKIGLVTALSGQSAKSGEAISRGIGLAIEEINRNGGVLGRPLELV ARDDEANPSKGVLAARELIQRAGVVALIGGLDTPVSMAIVPIANQMKVPFVGPWAAGTGITRNGAVDNYVFRVSAVDALV DEALVAYAVKTYGAKKPGAILVNNAWGESNQQGLVSALKAAGLPSAGIEKYEANDIDMVPQLSRLREAGADALFLVGNVG PSAQVVKSLDRMGWTVPVISHWGPAGGRFDELAGPGAARVHFVQTFTFAGNDSPKAKAVLDALKAKYPAIKSMADVTPAV GIANAYDATHLIALAIQAAGATEGPKVRDGFYKVAPYSGLIKTYEAPFAPGQHDALKPDDYIFASFKNGEIVAVSK >Mature_395_residues PQRLKPTRSLARRFVLGALLAGVTSIGAVRAAEPVKIGLVTALSGQSAKSGEAISRGIGLAIEEINRNGGVLGRPLELVA RDDEANPSKGVLAARELIQRAGVVALIGGLDTPVSMAIVPIANQMKVPFVGPWAAGTGITRNGAVDNYVFRVSAVDALVD EALVAYAVKTYGAKKPGAILVNNAWGESNQQGLVSALKAAGLPSAGIEKYEANDIDMVPQLSRLREAGADALFLVGNVGP SAQVVKSLDRMGWTVPVISHWGPAGGRFDELAGPGAARVHFVQTFTFAGNDSPKAKAVLDALKAKYPAIKSMADVTPAVG IANAYDATHLIALAIQAAGATEGPKVRDGFYKVAPYSGLIKTYEAPFAPGQHDALKPDDYIFASFKNGEIVAVSK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=328, Percent_Identity=22.8658536585366, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI48994941, Length=290, Percent_Identity=22.0689655172414, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41154; Mature: 41023
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRLKPTRSLARRFVLGALLAGVTSIGAVRAAEPVKIGLVTALSGQSAKSGEAISRGIG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHCCC LAIEEINRNGGVLGRPLELVARDDEANPSKGVLAARELIQRAGVVALIGGLDTPVSMAIV CEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEE PIANQMKVPFVGPWAAGTGITRNGAVDNYVFRVSAVDALVDEALVAYAVKTYGAKKPGAI ECCCCCCCCEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEE LVNNAWGESNQQGLVSALKAAGLPSAGIEKYEANDIDMVPQLSRLREAGADALFLVGNVG EEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCC PSAQVVKSLDRMGWTVPVISHWGPAGGRFDELAGPGAARVHFVQTFTFAGNDSPKAKAVL CHHHHHHHHHHCCCEEEEHHCCCCCCCCCHHHCCCCCCEEEEEEEEEECCCCCCHHHHHH DALKAKYPAIKSMADVTPAVGIANAYDATHLIALAIQAAGATEGPKVRDGFYKVAPYSGL HHHHHHCHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHH IKTYEAPFAPGQHDALKPDDYIFASFKNGEIVAVSK HHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEC >Mature Secondary Structure PQRLKPTRSLARRFVLGALLAGVTSIGAVRAAEPVKIGLVTALSGQSAKSGEAISRGIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHCCC LAIEEINRNGGVLGRPLELVARDDEANPSKGVLAARELIQRAGVVALIGGLDTPVSMAIV CEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEE PIANQMKVPFVGPWAAGTGITRNGAVDNYVFRVSAVDALVDEALVAYAVKTYGAKKPGAI ECCCCCCCCEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEE LVNNAWGESNQQGLVSALKAAGLPSAGIEKYEANDIDMVPQLSRLREAGADALFLVGNVG EEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCC PSAQVVKSLDRMGWTVPVISHWGPAGGRFDELAGPGAARVHFVQTFTFAGNDSPKAKAVL CHHHHHHHHHHCCCEEEEHHCCCCCCCCCHHHCCCCCCEEEEEEEEEECCCCCCHHHHHH DALKAKYPAIKSMADVTPAVGIANAYDATHLIALAIQAAGATEGPKVRDGFYKVAPYSGL HHHHHHCHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHH IKTYEAPFAPGQHDALKPDDYIFASFKNGEIVAVSK HHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]