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The map label for this gene is yrrC [H]

Identifier: 218533192

GI number: 218533192

Start: 5700531

End: 5702783

Strand: Reverse

Name: yrrC [H]

Synonym: Mchl_5319

Alternate gene names: 218533192

Gene position: 5702783-5700531 (Counterclockwise)

Preceding gene: 218533193

Following gene: 218533191

Centisome position: 98.7

GC content: 65.42

Gene sequence:

>2253_bases
GTGGGCACGCAGGTGAACAAGCGGGCGAGACCGGGGCAGTTCGAACGTGGCGCTCCCGTCGAGACGCTTGCCGGGACGGT
CGAGCGCGTCACCTTCCACAATGCCGAGACCGGCTTCTGCGTGCTCAAGGTACAGGCCCGCGGCAAGCGCGATCTCGTTC
CTGTAGTTGGGCATGCGCCCGCGATCGGAGCAGGCGAGTGGATCACCGCGACCGGCATCTGGTTCACCGATCGCCAGCAC
GGCCTCCAGTTCAAGGCCGACACGCTGAAGGCGACGCCACCTATCGGCGTGGAAGGCATCGAGAAGTACCTCGCCTCCGG
CTACATGCGCGGCATTGGTCCGGCGATGGCGAAGCGGATCGTGGCCCTGTTCGGAGAAAGCACCTTCGAAATTATCGAGG
CCGAGCCTGACCGCCTGATGGAGGTTGGCGGCATCGGCCCAAAACGCGCCGAGCGAATCGTGCGCGGCTGGGCTGAGCAG
AAGGCCGTGCGGGAGATCATGCTGTTCCTGCACGCCCACGGCGTCGGCACGGCGCGAGCGGTTCGCATCTTCAAGACCTA
CGGCCATGAGTCGATCAAGGTCATGACCGAGGACCCGTACCGCCTCGCCAGGGACATCCGCGGCATCGGCTTCAAGACGG
CCGACGCGATTGCGATGAAGCTCGGGCTGACGAAGGAGGCGCCTCAGCGGCTACGGGCTGGGGTGTCCTTCGCCCTCCAG
ACAGCCATGGACGAGGGTCACTGCGCGCTGCCGGTCGCTCGCCTGACGGAACTCGCCCAGAAGCTGCTGGAGGTCGAGGC
CCCCCTGATCCGCTCGGCGGTCGCTGAGGAGATCGAGCGCGGCGACGAGGTCATCCAGGACATCATCGGCGATCAGGCAT
GCGTGTTCCTCCGCGGCCTCCACGCAGCCGAACGCGGCATTGCCGACCGGCTGATCGAGCGGGCGTCCGGCACGCCGCCT
TGGTCGGAAATCGACCTCGGCAAGGCTCTGCCCTGGGTCGAACAGAAGACCGGCAAGGCGCTCTCGCCATCGCAGGCAGA
GGCGGTCCGGCTGCTGCTCGCCTCCAAACTCTGCGTCATCACGGGCGGCCCAGGCGTGGGCAAGACCAGCACGCTCGACT
CCGTGCTGCGCATCCTTCAAGCCAAAGGCGTGCACGTGCTCCTGGCTGCTCCGACCGGCCGCGCCGCCAAGCGGATGACT
GAGCAGACCGGGCTAGAGGCTAAGACCATTCACCGGCTGCTGGAGATTGACCCCAAGCACGGGGGCTTCACACGCGACGA
GGAGAGCCCGCTCAATTGCGACCTGCTCGTCATCGACGAGACCTCGATGGTGGACGTGCCGTTGATGAACGCGCTCCTGA
AGGCGGTGCCGCCGCGGGCAGGTCTGCTTCTCGTAGGCGATGTGGATCAGCTACCCTCAGTCGGACCAGGGCAGGTGCTG
GCGGACGTGATCGCATCCGAACGCGTGCCAGTGGCCCGACTGACTGAGGTGTTCCGGCAGGCGGCCGAGAGCCGGATCAT
CGTCAATGCCCACCGGATCAACCACGGCCAGATGCCAGAGAGACCCCGTCCCGGCGAGAAGGCCGACTTCTACCTGATCG
AGATCGATGACCCTGAGGTCGGCGTCGGTAAGCTGATCGAGATCGTCACGAGGCGCATCCCGCGGACTTTCGGGCTCGAT
CCCCTGCGGGACGTGCAGGTTCTGACACCGATGCAGAGAGGTTCGCTTGGCTCACGCAACCTCAACCACGAACTTCAGCG
CGTGCTGAACCCGAACCCACCGGCACAGGTCGAGCGCTTCGGCTGGCGTTTCGCGCCCGGCGACCGGGTCATGGAAACCC
AAAACGACTATGACCGCGAGGTGTTCAACGGTGACCTCGGCATGGTGGCCCGCATCGACGACGACGAAGGAGCGGTAATT
GTCACCTTCGACGATCGGGAGGTGATCTACCCGTTCGGCGAACTCGACACGTTGGTTCCTGCCTTCGCCACCACGATCCA
CAAGAGTCAGGGCTCGGAGTACCCGGCCGTGGTGATCCCGATCGTGACGCAGCACTTCAACATGCTCGCCCGCAACCTGC
TCTACACGGGTGTGACCCGCGGCAAGCAACTTGTCGTGCTGATCGGTCAGAGGAAGGCGATCGGCATGGCCGTGCGGAGC
GGTCAGACGAAGCGTCGCTTCACGAAGCTGCGCGAGTGGCTTGTTGCCGGGGCCGGGCGCGCATCGTCGGCGAAGCTACG
GATTCCAAGCTGA

Upstream 100 bases:

>100_bases
CCGCTGAGGGGGCGATAGCGGCTTGAGGCGTCTATGCTCTGCCGTTGGCGCCATGGATGTGCGTGAAGGCACAACTGCCT
TATGATGGACAGCGCAGGGC

Downstream 100 bases:

>100_bases
CACTTGAACCTCGTAACATCCCGGGCGAGCCGTCGCACGATTGATAAATATCTCCAGAGATATTTTGGAGATTACAGTGC
GTTTTCGAGACCTCGCGCGC

Product: helicase, RecD/TraA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 750; Mature: 749

Protein sequence:

>750_residues
MGTQVNKRARPGQFERGAPVETLAGTVERVTFHNAETGFCVLKVQARGKRDLVPVVGHAPAIGAGEWITATGIWFTDRQH
GLQFKADTLKATPPIGVEGIEKYLASGYMRGIGPAMAKRIVALFGESTFEIIEAEPDRLMEVGGIGPKRAERIVRGWAEQ
KAVREIMLFLHAHGVGTARAVRIFKTYGHESIKVMTEDPYRLARDIRGIGFKTADAIAMKLGLTKEAPQRLRAGVSFALQ
TAMDEGHCALPVARLTELAQKLLEVEAPLIRSAVAEEIERGDEVIQDIIGDQACVFLRGLHAAERGIADRLIERASGTPP
WSEIDLGKALPWVEQKTGKALSPSQAEAVRLLLASKLCVITGGPGVGKTSTLDSVLRILQAKGVHVLLAAPTGRAAKRMT
EQTGLEAKTIHRLLEIDPKHGGFTRDEESPLNCDLLVIDETSMVDVPLMNALLKAVPPRAGLLLVGDVDQLPSVGPGQVL
ADVIASERVPVARLTEVFRQAAESRIIVNAHRINHGQMPERPRPGEKADFYLIEIDDPEVGVGKLIEIVTRRIPRTFGLD
PLRDVQVLTPMQRGSLGSRNLNHELQRVLNPNPPAQVERFGWRFAPGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVI
VTFDDREVIYPFGELDTLVPAFATTIHKSQGSEYPAVVIPIVTQHFNMLARNLLYTGVTRGKQLVVLIGQRKAIGMAVRS
GQTKRRFTKLREWLVAGAGRASSAKLRIPS

Sequences:

>Translated_750_residues
MGTQVNKRARPGQFERGAPVETLAGTVERVTFHNAETGFCVLKVQARGKRDLVPVVGHAPAIGAGEWITATGIWFTDRQH
GLQFKADTLKATPPIGVEGIEKYLASGYMRGIGPAMAKRIVALFGESTFEIIEAEPDRLMEVGGIGPKRAERIVRGWAEQ
KAVREIMLFLHAHGVGTARAVRIFKTYGHESIKVMTEDPYRLARDIRGIGFKTADAIAMKLGLTKEAPQRLRAGVSFALQ
TAMDEGHCALPVARLTELAQKLLEVEAPLIRSAVAEEIERGDEVIQDIIGDQACVFLRGLHAAERGIADRLIERASGTPP
WSEIDLGKALPWVEQKTGKALSPSQAEAVRLLLASKLCVITGGPGVGKTSTLDSVLRILQAKGVHVLLAAPTGRAAKRMT
EQTGLEAKTIHRLLEIDPKHGGFTRDEESPLNCDLLVIDETSMVDVPLMNALLKAVPPRAGLLLVGDVDQLPSVGPGQVL
ADVIASERVPVARLTEVFRQAAESRIIVNAHRINHGQMPERPRPGEKADFYLIEIDDPEVGVGKLIEIVTRRIPRTFGLD
PLRDVQVLTPMQRGSLGSRNLNHELQRVLNPNPPAQVERFGWRFAPGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVI
VTFDDREVIYPFGELDTLVPAFATTIHKSQGSEYPAVVIPIVTQHFNMLARNLLYTGVTRGKQLVVLIGQRKAIGMAVRS
GQTKRRFTKLREWLVAGAGRASSAKLRIPS
>Mature_749_residues
GTQVNKRARPGQFERGAPVETLAGTVERVTFHNAETGFCVLKVQARGKRDLVPVVGHAPAIGAGEWITATGIWFTDRQHG
LQFKADTLKATPPIGVEGIEKYLASGYMRGIGPAMAKRIVALFGESTFEIIEAEPDRLMEVGGIGPKRAERIVRGWAEQK
AVREIMLFLHAHGVGTARAVRIFKTYGHESIKVMTEDPYRLARDIRGIGFKTADAIAMKLGLTKEAPQRLRAGVSFALQT
AMDEGHCALPVARLTELAQKLLEVEAPLIRSAVAEEIERGDEVIQDIIGDQACVFLRGLHAAERGIADRLIERASGTPPW
SEIDLGKALPWVEQKTGKALSPSQAEAVRLLLASKLCVITGGPGVGKTSTLDSVLRILQAKGVHVLLAAPTGRAAKRMTE
QTGLEAKTIHRLLEIDPKHGGFTRDEESPLNCDLLVIDETSMVDVPLMNALLKAVPPRAGLLLVGDVDQLPSVGPGQVLA
DVIASERVPVARLTEVFRQAAESRIIVNAHRINHGQMPERPRPGEKADFYLIEIDDPEVGVGKLIEIVTRRIPRTFGLDP
LRDVQVLTPMQRGSLGSRNLNHELQRVLNPNPPAQVERFGWRFAPGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVIV
TFDDREVIYPFGELDTLVPAFATTIHKSQGSEYPAVVIPIVTQHFNMLARNLLYTGVTRGKQLVVLIGQRKAIGMAVRSG
QTKRRFTKLREWLVAGAGRASSAKLRIPS

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789182, Length=574, Percent_Identity=24.7386759581882, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 82039; Mature: 81908

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTQVNKRARPGQFERGAPVETLAGTVERVTFHNAETGFCVLKVQARGKRDLVPVVGHAP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCEEECCCCC
AIGAGEWITATGIWFTDRQHGLQFKADTLKATPPIGVEGIEKYLASGYMRGIGPAMAKRI
CCCCCCEEEEECEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
VALFGESTFEIIEAEPDRLMEVGGIGPKRAERIVRGWAEQKAVREIMLFLHAHGVGTARA
HHHHCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VRIFKTYGHESIKVMTEDPYRLARDIRGIGFKTADAIAMKLGLTKEAPQRLRAGVSFALQ
HHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TAMDEGHCALPVARLTELAQKLLEVEAPLIRSAVAEEIERGDEVIQDIIGDQACVFLRGL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HAAERGIADRLIERASGTPPWSEIDLGKALPWVEQKTGKALSPSQAEAVRLLLASKLCVI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCEEEE
TGGPGVGKTSTLDSVLRILQAKGVHVLLAAPTGRAAKRMTEQTGLEAKTIHRLLEIDPKH
ECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
GGFTRDEESPLNCDLLVIDETSMVDVPLMNALLKAVPPRAGLLLVGDVDQLPSVGPGQVL
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHCCCCCHHHHH
ADVIASERVPVARLTEVFRQAAESRIIVNAHRINHGQMPERPRPGEKADFYLIEIDDPEV
HHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
GVGKLIEIVTRRIPRTFGLDPLRDVQVLTPMQRGSLGSRNLNHELQRVLNPNPPAQVERF
CHHHHHHHHHHHCCHHCCCCCCCCHHHHCCHHCCCCCCCCHHHHHHHHCCCCCCHHHHHC
GWRFAPGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVIVTFDDREVIYPFGELDTLVP
CCEECCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCEEEEEECCCEEEECCCHHHHHHH
AFATTIHKSQGSEYPAVVIPIVTQHFNMLARNLLYTGVTRGKQLVVLIGQRKAIGMAVRS
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHC
GQTKRRFTKLREWLVAGAGRASSAKLRIPS
CCHHHHHHHHHHHHHHCCCCCCCCCEECCC
>Mature Secondary Structure 
GTQVNKRARPGQFERGAPVETLAGTVERVTFHNAETGFCVLKVQARGKRDLVPVVGHAP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCEEECCCCC
AIGAGEWITATGIWFTDRQHGLQFKADTLKATPPIGVEGIEKYLASGYMRGIGPAMAKRI
CCCCCCEEEEECEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
VALFGESTFEIIEAEPDRLMEVGGIGPKRAERIVRGWAEQKAVREIMLFLHAHGVGTARA
HHHHCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VRIFKTYGHESIKVMTEDPYRLARDIRGIGFKTADAIAMKLGLTKEAPQRLRAGVSFALQ
HHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TAMDEGHCALPVARLTELAQKLLEVEAPLIRSAVAEEIERGDEVIQDIIGDQACVFLRGL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HAAERGIADRLIERASGTPPWSEIDLGKALPWVEQKTGKALSPSQAEAVRLLLASKLCVI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCEEEE
TGGPGVGKTSTLDSVLRILQAKGVHVLLAAPTGRAAKRMTEQTGLEAKTIHRLLEIDPKH
ECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
GGFTRDEESPLNCDLLVIDETSMVDVPLMNALLKAVPPRAGLLLVGDVDQLPSVGPGQVL
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHCCCCCHHHHH
ADVIASERVPVARLTEVFRQAAESRIIVNAHRINHGQMPERPRPGEKADFYLIEIDDPEV
HHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
GVGKLIEIVTRRIPRTFGLDPLRDVQVLTPMQRGSLGSRNLNHELQRVLNPNPPAQVERF
CHHHHHHHHHHHCCHHCCCCCCCCHHHHCCHHCCCCCCCCHHHHHHHHCCCCCCHHHHHC
GWRFAPGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVIVTFDDREVIYPFGELDTLVP
CCEECCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCEEEEEECCCEEEECCCHHHHHHH
AFATTIHKSQGSEYPAVVIPIVTQHFNMLARNLLYTGVTRGKQLVVLIGQRKAIGMAVRS
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHC
GQTKRRFTKLREWLVAGAGRASSAKLRIPS
CCHHHHHHHHHHHHHHCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]