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The map label for this gene is 218533173

Identifier: 218533173

GI number: 218533173

Start: 5675761

End: 5676267

Strand: Reverse

Name: 218533173

Synonym: Mchl_5299

Alternate gene names: NA

Gene position: 5676267-5675761 (Counterclockwise)

Preceding gene: 218533174

Following gene: 218533170

Centisome position: 98.24

GC content: 69.43

Gene sequence:

>507_bases
GTGCTCGGACGTCAGACCTTCCTTGCCGCGCCTGCGGTCCTCGCTCTCGTCGCCCTGCTGCAGGGTTGTGCAGGGAAGAT
GACGCCCGACACGACCGGGCTGCCGAGCATGTACCTGCCGCTCACCACCGGCAGCACCGCGGTGGATACGGCGGCGGCCC
GGGACATGATCTCGGCCTATCGCCACAACAACGACGCCGCCCCGCTCGTCATCGATCCCGAATTGCAGCGGCTCGCCGAG
ACCGAGGCCGCCGCCATGGCCGCCTCGGACCGGCCGAGCAAGAGCCAGACGGTGCGCGCGGCCGTGACCCGGCTCGGCTA
TGACGGGGCGGATGCGAACCTCTCGGCGGGCTACCACACGCTCGCAGAGGCGTTCTCGGGCTGGCGCGACAGCCCTCCGC
ACCGGGCGGTCATGCTGTCTCCTGAGGCGACGCGAATGGGCATCGCCACCGCTTACGCGCCGGGCTCCAAATACAAGGTC
TACTGGGCGTTGCTGGTCGCTAAGTAG

Upstream 100 bases:

>100_bases
GCGCCGGCCCTGAGGATATCGGGGCCGGCGGCACCGATACACTTGAGTTTACCGGGCGCAGGGGCCACCTCATTCCCCTG
TTCACCGGAAAGCCGTTGTC

Downstream 100 bases:

>100_bases
CCGCGAGCGGCGCAGACGCCCTCAGGGTACGGCTTTGCCGTTCGGCGTCGGCGGCGGCTCGGCGAGAAGCGTAACCGTGA
CCCGGCGATTGGCCGCGAGA

Product: SCP-like extracellular

Products: NA

Alternate protein names: SCP-Like Extracellular Protein; Allergen V5/Tpx-1 Family Protein; Allergen V5/Tpx-1 ; Allergen V5/Tpx-1-Like Protein

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLGRQTFLAAPAVLALVALLQGCAGKMTPDTTGLPSMYLPLTTGSTAVDTAAARDMISAYRHNNDAAPLVIDPELQRLAE
TEAAAMAASDRPSKSQTVRAAVTRLGYDGADANLSAGYHTLAEAFSGWRDSPPHRAVMLSPEATRMGIATAYAPGSKYKV
YWALLVAK

Sequences:

>Translated_168_residues
MLGRQTFLAAPAVLALVALLQGCAGKMTPDTTGLPSMYLPLTTGSTAVDTAAARDMISAYRHNNDAAPLVIDPELQRLAE
TEAAAMAASDRPSKSQTVRAAVTRLGYDGADANLSAGYHTLAEAFSGWRDSPPHRAVMLSPEATRMGIATAYAPGSKYKV
YWALLVAK
>Mature_168_residues
MLGRQTFLAAPAVLALVALLQGCAGKMTPDTTGLPSMYLPLTTGSTAVDTAAARDMISAYRHNNDAAPLVIDPELQRLAE
TEAAAMAASDRPSKSQTVRAAVTRLGYDGADANLSAGYHTLAEAFSGWRDSPPHRAVMLSPEATRMGIATAYAPGSKYKV
YWALLVAK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17682; Mature: 17682

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRQTFLAAPAVLALVALLQGCAGKMTPDTTGLPSMYLPLTTGSTAVDTAAARDMISAY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
RHNNDAAPLVIDPELQRLAETEAAAMAASDRPSKSQTVRAAVTRLGYDGADANLSAGYHT
HCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
LAEAFSGWRDSPPHRAVMLSPEATRMGIATAYAPGSKYKVYWALLVAK
HHHHHCCCCCCCCCCEEEECCCCHHHCEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MLGRQTFLAAPAVLALVALLQGCAGKMTPDTTGLPSMYLPLTTGSTAVDTAAARDMISAY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
RHNNDAAPLVIDPELQRLAETEAAAMAASDRPSKSQTVRAAVTRLGYDGADANLSAGYHT
HCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
LAEAFSGWRDSPPHRAVMLSPEATRMGIATAYAPGSKYKVYWALLVAK
HHHHHCCCCCCCCCCEEEECCCCHHHCEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA