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The map label for this gene is ydhJ [H]

Identifier: 218533095

GI number: 218533095

Start: 5588084

End: 5589163

Strand: Reverse

Name: ydhJ [H]

Synonym: Mchl_5221

Alternate gene names: 218533095

Gene position: 5589163-5588084 (Counterclockwise)

Preceding gene: 218533096

Following gene: 218533094

Centisome position: 96.73

GC content: 69.17

Gene sequence:

>1080_bases
GTGAAACGCGACGACGAAGGGCCGGCCGAAAGCCGGCAACAGGATCACATCCCGGCCAGCGAGGCGCATTCCGACGAGCC
GCCCAAGGCGCAAGGCCCGGCCAAGGCGCTTCCGATCGGACGGCGTCGGCGAGGGGGCCGCCTGCTGCGGCTGGCCGCGA
CCGGCCTCGTCCTCGCCTTCGCGGCGGTGGCCGCCACCATCGTGTGGCAGTTCTACGTGACGGCGCCCTGGACACGCGAC
GGGCGGGTCCGCGTGCAGGTGGTCAACATCGCCCCGCAGGTCGCCGGCACCATCGTCGAGCTGCGAGTCACCGACAACCA
AGAGGTGAAGAAGGGCGACGTTCTCTACGTCATCGACCCGTTCGATTATCAGGAGGCGGTGGTCTCGGCCGAGGCCGCGA
TCAAGAACCGCGAGGCTGACCTCTCGGTGAAGGAGGCGCAGTCGGCCCGGCGCGCCGCACTCTCGACGGTCTCGACCTCG
GTCGAGGAGAAGCAGCAATTCGCGGGCACCGCCAAGATCGCCGAGGCGGCGCTGGAGACCGCTAGGTCGCAGCTTTCGCA
GGCGAAGAAGAATCTCGAGCGTACGCAGGTGCGCTCGACCGTGAACGGGCGCGTCACCAACCTGCTCCTGCGGGTCGGCG
ACTACGCGCAGACCGGCACCGCCAACGCGCGGGTGATCGACACCGATTCCTTCTGGGTCGACGGCTATTTCGAAGAAACC
AAGATGGCGCATATCCACGTCGGCGCCCCCGCCGAGATGGCGCTGATGGGCTACGGCGCCTCGCTGAAGGGCACGGTGGA
GAGCCTGACACTCGGCATCTCGACCGCCAACGCCGCGACGAGCACGCAAGGCCTGCCGAACGTCGATCCGGTCTATACCT
GGGTGCGGCTCGCCCAGCGGGTGCCGGTGCGCATCCGCATCGACCATGTGCCGCCGGAGGTGACCCTGGTGGCGGGCATG
ACCGCGACGGTGGTGGTCGGCGACGGCCGCGAGGGCCAGCCGTCCTGGGTTAAGGCCGCGCGCGACTGGATCCTTGGTCG
TCCCGATCGGACCGAGCCCGGCGCGGCGCCGAAGAACTGA

Upstream 100 bases:

>100_bases
TGGTGTTCCGCTGGATCCGGTTCGGGCGCTTCGTCGCCAACCCGCCTCTGGCGGAAGCGGGGATCTACGTCTGCCTTCTC
GCGCTCGTGGTGGTGCTCCT

Downstream 100 bases:

>100_bases
GGCCGCGACTGCCCGTGGACGGTGCGGCGTCTGCGAAAATTCGGTAGAGCGGCTTCATGGCCGCTTCCCCCCTCGTCCGC
TTCGCTCCCTCGCCGACCGG

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKRDDEGPAESRQQDHIPASEAHSDEPPKAQGPAKALPIGRRRRGGRLLRLAATGLVLAFAAVAATIVWQFYVTAPWTRD
GRVRVQVVNIAPQVAGTIVELRVTDNQEVKKGDVLYVIDPFDYQEAVVSAEAAIKNREADLSVKEAQSARRAALSTVSTS
VEEKQQFAGTAKIAEAALETARSQLSQAKKNLERTQVRSTVNGRVTNLLLRVGDYAQTGTANARVIDTDSFWVDGYFEET
KMAHIHVGAPAEMALMGYGASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQRVPVRIRIDHVPPEVTLVAGM
TATVVVGDGREGQPSWVKAARDWILGRPDRTEPGAAPKN

Sequences:

>Translated_359_residues
MKRDDEGPAESRQQDHIPASEAHSDEPPKAQGPAKALPIGRRRRGGRLLRLAATGLVLAFAAVAATIVWQFYVTAPWTRD
GRVRVQVVNIAPQVAGTIVELRVTDNQEVKKGDVLYVIDPFDYQEAVVSAEAAIKNREADLSVKEAQSARRAALSTVSTS
VEEKQQFAGTAKIAEAALETARSQLSQAKKNLERTQVRSTVNGRVTNLLLRVGDYAQTGTANARVIDTDSFWVDGYFEET
KMAHIHVGAPAEMALMGYGASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQRVPVRIRIDHVPPEVTLVAGM
TATVVVGDGREGQPSWVKAARDWILGRPDRTEPGAAPKN
>Mature_359_residues
MKRDDEGPAESRQQDHIPASEAHSDEPPKAQGPAKALPIGRRRRGGRLLRLAATGLVLAFAAVAATIVWQFYVTAPWTRD
GRVRVQVVNIAPQVAGTIVELRVTDNQEVKKGDVLYVIDPFDYQEAVVSAEAAIKNREADLSVKEAQSARRAALSTVSTS
VEEKQQFAGTAKIAEAALETARSQLSQAKKNLERTQVRSTVNGRVTNLLLRVGDYAQTGTANARVIDTDSFWVDGYFEET
KMAHIHVGAPAEMALMGYGASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQRVPVRIRIDHVPPEVTLVAGM
TATVVVGDGREGQPSWVKAARDWILGRPDRTEPGAAPKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=281, Percent_Identity=40.9252669039146, Blast_Score=221, Evalue=8e-59,
Organism=Escherichia coli, GI1789637, Length=295, Percent_Identity=37.2881355932203, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1790519, Length=302, Percent_Identity=29.8013245033113, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789041, Length=343, Percent_Identity=26.530612244898, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 38775; Mature: 38775

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDDEGPAESRQQDHIPASEAHSDEPPKAQGPAKALPIGRRRRGGRLLRLAATGLVLAF
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH
AAVAATIVWQFYVTAPWTRDGRVRVQVVNIAPQVAGTIVELRVTDNQEVKKGDVLYVIDP
HHHHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECC
FDYQEAVVSAEAAIKNREADLSVKEAQSARRAALSTVSTSVEEKQQFAGTAKIAEAALET
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSQLSQAKKNLERTQVRSTVNGRVTNLLLRVGDYAQTGTANARVIDTDSFWVDGYFEET
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEECCCEEECCEECCC
KMAHIHVGAPAEMALMGYGASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQR
EEEEEEECCCHHEEEEECCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHC
VPVRIRIDHVPPEVTLVAGMTATVVVGDGREGQPSWVKAARDWILGRPDRTEPGAAPKN
CCEEEEEECCCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRDDEGPAESRQQDHIPASEAHSDEPPKAQGPAKALPIGRRRRGGRLLRLAATGLVLAF
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH
AAVAATIVWQFYVTAPWTRDGRVRVQVVNIAPQVAGTIVELRVTDNQEVKKGDVLYVIDP
HHHHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECC
FDYQEAVVSAEAAIKNREADLSVKEAQSARRAALSTVSTSVEEKQQFAGTAKIAEAALET
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSQLSQAKKNLERTQVRSTVNGRVTNLLLRVGDYAQTGTANARVIDTDSFWVDGYFEET
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEECCCEEECCEECCC
KMAHIHVGAPAEMALMGYGASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQR
EEEEEEECCCHHEEEEECCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHC
VPVRIRIDHVPPEVTLVAGMTATVVVGDGREGQPSWVKAARDWILGRPDRTEPGAAPKN
CCEEEEEECCCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]